Mingxuan Gu, M. Sc.

2026

Journal Articles

• Mei S., Thies M., Xia Y., Sun Y., Wu F., Fan F., Gu M., Ye C., Huang Y., Christlein V., Maier A.:
  Vision transformer Hook for dense predictions
  In: Pattern Recognition 179 (2026), p. 1-12
  ISSN: 0031-3203
  DOI: 10.1016/j.patcog.2026.113818
  URL: https://www.sciencedirect.com/science/article/pii/S0031320326007831?via=ihub
  BibTeX: Download

Conference Contributions

• Sun Y., Schneider LS., Schwarz A., Gu M., Mei S., Ye C., Bayer S., Maier A.:
  LSTT: Latent Spatio-Temporal Transformer for Non-rigid Motion Compensation in CBCT
  1st International Workshop on Reconstruction and Imaging Motion Estimation, RIME 2025, and 7th International Workshop on Graphs in Biomedical Image Analysis, GRAIL 2025, held in conjunction with the 28th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025 (Daejeon, September 27, 2025 - September 27, 2025)
  In: Lina Felsner, Thomas Küstner, Andreas Maier, Chen Qin, Seyed-Ahmad Ahmadi, Anees Kazi, Xiaoling Hu (ed.): Lecture Notes in Computer Science 2026
  DOI: 10.1007/978-3-032-06103-4_8
  BibTeX: Download

2025

Journal Articles

• Possart D., Mill L., Vollnhals F., Hildebrand T., Suter P., Hoffmann M., Utz J., Augsburger D., Thies M., Gu M., Wagner F., Sarau G., Christiansen S., Breininger K.:
  Addressing data scarcity in nanomaterial segmentation networks with differentiable rendering and generative modeling
  In: npj Computational Materials 11 (2025), Article No.: 197
  ISSN: 2057-3960
  DOI: 10.1038/s41524-025-01702-6
  BibTeX: Download
• Mei S., Fan F., Thies M., Gu M., Wagner F., Aust O., Erceg I., Mirzaei Z., Neag G., Sun Y., Huang Y., Maier A.:
  BigReg: an efficient registration pipeline for high-resolution X-ray and light-sheet fluorescence microscopy
  In: Journal of Medical Imaging (2025)
  ISSN: 2329-4310
  DOI: 10.1117/1.JMI.12.5.054004
  BibTeX: Download
• Sun Y., Huang Y., Yang Z., Schneider LS., Thies M., Gu M., Mei S., Bayer S., Zöllner FG., Maier A.:
  EAGLE: an edge-aware gradient localization enhanced loss for CT image reconstruction
  In: Journal of Medical Imaging 12 (2025), Article No.: 014001
  ISSN: 2329-4310
  DOI: 10.1117/1.JMI.12.1.014001
  BibTeX: Download

Conference Contributions

• Sun Y., Schneider LS., Ye C., Gu M., Mei S., Bayer S., Maier A.:
  Learning Wavelet-Sparse FDK for 3D Cone-Beam CT Reconstruction
  International Conference on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (, May 27, 2025 - May 30, 2025)
  BibTeX: Download
• Sun Y., Sun Y., Schneider LS., Schwarz A., Gu M., Mei S., Ye C., Bayer S., Maier A.:
  LSTT: Latent Spatio-Temporal Transformer for Non-rigid Motion Compensation in CBCT
  In: International Workshop on Reconstruction and Imaging Motion Estimation 2025
  BibTeX: Download

2024

Journal Articles

• Thies M., Wagner F., Maul N., Yu H., Goldmann M., Schneider LS., Gu M., Mei S., Folle L., Preuhs A., Manhart M., Maier A.:
  A gradient-based approach to fast and accurate head motion compensation in cone-beam CT
  In: IEEE Transactions on Medical Imaging (2024), p. 1-1
  ISSN: 0278-0062
  DOI: 10.1109/TMI.2024.3474250
  BibTeX: Download

Conference Contributions

• Gu M., Thies M., Mei S., Wagner F., Fan M., Sun Y., Pan Z., Vesal S., Kosti RV., Possart D., Utz J., Maier A.:
  Unsupervised Domain Adaptation Using Soft-Labeled Contrastive Learning with Reversed Monte Carlo Method for Cardiac Image Segmentation
  27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 (Marrakesh, October 6, 2024 - October 10, 2024)
  In: Marius George Linguraru, Qi Dou, Aasa Feragen, Stamatia Giannarou, Ben Glocker, Karim Lekadir, Julia A. Schnabel (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. 27th International Conference, Marrakesh, Morocco, October 6–10, 2024, Proceedings, Part IX, Cham: 2024
  DOI: 10.1007/978-3-031-72114-4_65
  BibTeX: Download
• Thies M., Maul N., Mei S., Pfaff L., Vysotskaya N., Gu M., Utz J., Possart D., Folle L., Wagner F., Maier A.:
  Differentiable Score-Based Likelihoods: Learning CT Motion Compensation from Clean Images
  Medical Image Computing and Computer Assisted Intervention – MICCAI 2024
  In: Medical Image Computing and Computer Assisted Intervention – MICCAI 2024, Cham: 2024
  DOI: 10.1007/978-3-031-72104-5_25
  BibTeX: Download
• Mei S., Fan F., Wagner F., Thies M., Gu M., Sun Y., Maier A.:
  Segmentation-Guided Knee Radiograph Generation using Conditional Diffusion Models
  The 8th International Conference on Image Formation in X-Ray Computed Tomography (Bamberg, Germany, August 5, 2024 - August 9, 2024)
  DOI: 10.48550/arXiv.2404.03541
  URL: https://arxiv.org/pdf/2404.03541
  BibTeX: Download
• Sun Y., Schneider LS., Fan F., Thies M., Gu M., Mei S., Zhou Y., Bayer S., Maier A.:
  Data-Driven Filter Design in FBP: Transforming CT Reconstruction with Trainable Fourier Series
  (2024)
  DOI: 10.48550/arXiv.2401.16039
  BibTeX: Download
• Thies M., Wagner F., Gu M., Mei S., Huang Y., Pechmann S., Aust O., Weidner D., Neag G., Uderhardt S., Schett G., Christiansen S., Maier A.:
  Exploring Epipolar Consistency Conditions for Rigid Motion Compensation in In-vivo X-ray Microscopy
  German Conference on Medical Image Computing, BVM 2024 (Erlangen, March 10, 2024 - March 12, 2024)
  In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024. BVM 2024, Wiesbaden: 2024
  DOI: 10.1007/978-3-658-44037-4_60
  URL: https://arxiv.org/abs/2303.00449
  BibTeX: Download
• Thies M., Wagner F., Maul N., Mei S., Gu M., Pfaff L., Vysotskaya N., Yu H., Maier A.:
  On the influence of smoothness constraints in computed tomography motion compensation
  8th International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting) (Bamberg, August 5, 2024 - August 9, 2024)
  URL: https://www.ct-meeting.org/?p=program
  BibTeX: Download

2023

Journal Articles

• Thies M., Wagner F., Maul N., Folle L., Meier M., Rohleder M., Schneider LS., Pfaff L., Gu M., Utz J., Denzinger F., Manhart M., Maier A.:
  Gradient-based geometry learning for fan-beam CT reconstruction
  In: Physics in Medicine and Biology 68 (2023), Article No.: 205004
  ISSN: 0031-9155
  DOI: 10.1088/1361-6560/acf90e
  URL: https://iopscience.iop.org/article/10.1088/1361-6560/acf90e
  BibTeX: Download

Conference Contributions

• Raghunath A., Wagner F., Thies M., Gu M., Pechmann S., Aust O., Weidner D., Neag G., Schett G., Christiansen SH., Uderhardt S., Maier A.:
  Unsupervised Super Resolution in X-ray Microscopy using a Cycle-consistent Generative Model
  BVM Workshop Bildverarbeitung für die Medizin 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
  In: Bildverarbeitung für die Medizin 2023 2023
  DOI: 10.1007/978-3-658-41657-7_19
  BibTeX: Download
• Gu M., Thies M., Wagner F., Pechmann S., Aust O., Weidner D., Neag G., Pan Z., Utz J., Schett G., Christiansen S., Uderhardt S., Maier A.:
  Cavity Segmentation in X-ray Microscopy Scans of Mouse Tibiae
  Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
  In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
  DOI: 10.1007/978-3-658-41657-7_56
  BibTeX: Download
• Utz J., Weise T., Schlereth M., Wagner F., Thies M., Gu M., Uderhardt S., Breininger K.:
  Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN
  2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 (Paris, October 2, 2023 - October 6, 2023)
  In: Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 2023
  DOI: 10.1109/ICCVW60793.2023.00417
  BibTeX: Download
• Utz J., Schlereth M., Qiu J., Thies M., Wagner F., Brahim OB., Gu M., Uderhardt S., Breininger K.:
  McLabel: A Local Thresholding Tool for Efficient Semi-automatic Labelling of Cells in Fluorescence Microscopy
  Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
  In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
  DOI: 10.1007/978-3-658-41657-7_20
  BibTeX: Download
• Wagner F., Thies M., Pfaff L., Maul N., Pechmann S., Gu M., Utz J., Aust O., Weidner D., Neag G., Uderhardt S., Choi JH., Maier A.:
  Noise2Contrast: Multi-contrast Fusion Enables Self-supervised Tomographic Image Denoising
  28th International Conference on Information Processing in Medical Imaging, IPMI 2023 (San Carlos de Bariloche, ARG, June 18, 2023 - June 23, 2023)
  In: Alejandro Frangi, Marleen de Bruijne, Demian Wassermann, Nassir Navab (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
  DOI: 10.1007/978-3-031-34048-2_59
  BibTeX: Download
• Wagner F., Thies M., Pfaff L., Aust O., Pechmann S., Weidner D., Maul N., Rohleder M., Gu M., Utz J., Denzinger F., Maier A.:
  On the Benefit of Dual-Domain Denoising in a Self-Supervised Low-Dose CT Setting
  20th IEEE International Symposium on Biomedical Imaging, ISBI 2023 (Cartagena, April 18, 2023 - April 21, 2023)
  In: Proceedings - International Symposium on Biomedical Imaging 2023
  DOI: 10.1109/ISBI53787.2023.10230511
  BibTeX: Download

2022

Journal Articles

• Wagner F., Thies M., Denzinger F., Gu M., Patwari M., Ploner S., Maul N., Pfaff L., Huang Y., Maier A.:
  Trainable joint bilateral filters for enhanced prediction stability in low-dose CT
  In: Scientific Reports 12 (2022), Article No.: 17540
  ISSN: 2045-2322
  DOI: 10.1038/s41598-022-22530-4
  BibTeX: Download
• Thies M., Wagner F., Huang Y., Gu M., Kling L., Pechmann S., Aust O., Grüneboom A., Schett G., Christiansen SH., Maier A.:
  Calibration by differentiation – Self-supervised calibration for X-ray microscopy using a differentiable cone-beam reconstruction operator
  In: Journal of Microscopy (2022)
  ISSN: 0022-2720
  DOI: 10.1111/jmi.13125
  BibTeX: Download
• Wagner F., Thies M., Gu M., Huang Y., Pechmann S., Patwari M., Ploner S., Aust O., Uderhardt S., Schett G., Christiansen SH., Maier A.:
  Ultra low‐parameter denoising: Trainable bilateral filter layers in computed tomography
  In: Medical Physics 49 (2022), p. 5107-5120
  ISSN: 0094-2405
  DOI: 10.1002/mp.15718
  BibTeX: Download

Conference Contributions

• Gu M., Vesal S., Kosti RV., Maier A.:
  Few-shot Unsupervised Domain Adaptation for Multi-modal Cardiac Image Segmentation
  German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
  In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
  DOI: 10.1007/978-3-658-36932-3_5
  BibTeX: Download
• Thies M., Wagner F., Gu M., Folle L., Felsner L., Maier A.:
  Learned Cone-Beam CT Reconstruction Using Neural Ordinary Differential Equations
  7th International Conference on Image Formation in X-Ray Computed Tomography (Baltimore, June 12, 2022 - June 16, 2022)
  In: Proceedings Volume 12304, 7th International Conference on Image Formation in X-Ray Computed Tomography; 1230409 (2022) 2022
  DOI: 10.1117/12.2646442
  BibTeX: Download
• Wagner F., Thies M., Karolczak M., Pechmann S., Huang Y., Gu M., Kling L., Weidner D., Aust O., Schett G., Christiansen S., Maier A.:
  Monte Carlo Dose Simulation for In-Vivo X-Ray Nanoscopy
  German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
  In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
  DOI: 10.1007/978-3-658-36932-3_22
  BibTeX: Download

2021

Journal Articles

• Vesal S., Gu M., Kosti RV., Maier A., Ravikumar N.:
  Adapt Everywhere: Unsupervised Adaptation of Point-Clouds and Entropy Minimisation for Multi-modal Cardiac Image Segmentation
  In: IEEE Transactions on Medical Imaging (2021)
  ISSN: 0278-0062
  DOI: 10.1109/TMI.2021.3066683
  BibTeX: Download

2020

Journal Articles

• Vesal S., Gu M., Maier A., Ravikumar N.:
  Spatio-temporal Multi-task Learning for Cardiac MRI Left Ventricle Quantification
  In: IEEE Journal of Biomedical and Health Informatics (2020)
  ISSN: 2168-2194
  DOI: 10.1109/JBHI.2020.3046449
  URL: https://ieeexplore.ieee.org/document/9302580
  BibTeX: Download