Learning Algorithms for Medical Big Data Analysis (LAMBDA)

The Learning Algorithms for Medical Big Data Analysis (LAMBDA) group is a research group within FAU’s Pattern Recognition Lab (Lehrstuhl für Mustererkennung), led by Prof. Andreas Maier. The group applies advanced machine learning and deep learning methods to multi-modal medical imaging data, with the overarching goal of improving clinical decision-making. Its current research spans identifying malignant tumor subtypes in breast cancer, linking image-based features to gene expression and disease progression, and exploring novel therapeutic strategies such as immune cell guidance and response activation.

Its project portfolio reflects this breadth: digitalizing clinical data using graph databases to make heterogeneous hospital records more usable for clinical staff (funded by the Bavarian Ministry of Economic Affairs), a multi-modal, multi-scale imaging framework for early breast cancer diagnosis, deep learning methods for multi-modal cardiac MR image analysis and quantification (DAAD-funded), and deep learning–based segmentation and landmark detection on X-ray images to support trauma surgery (funded by Siemens). The group also connects closely with FAU’s broader work in generative AI and image analysis, and hosts the λ (Lambda) Colloquium, a recurring seminar series where members and invited guests present and discuss ongoing work.

33 members · 3 open topics · 19 running theses

Open Positions

Title	Student	Supervisors
Federated Learning for Heterogeneous Medical Image Segmentation	–	Sheethal Bhat
AI-Based Prediction of Post-Operative Neurological Deficits in Glioma Patients	–	Sheethal Bhat
MRI as a biomarker for Brain Amyloid deposition	–	Sheethal Bhat

Current Theses & Projects

Title	Student	Supervisors
Uncertainty-Aware Quality Control for Multi-Structure 2D Echocardiography Segmentation	–	Adarsh Raghunath, Andreas Maier
Multi-Task Learning for ECG Analysis with Self- and Semi-Supervised Representation Learning	Mehran Pashaei	Tomás Arias Vergara, Sheethal Bhat
PseudoMed-IQA: Radiologist Guided Pseudo Reference Modeling for Reference Free Medical MRI Image Quality Assessment	–	Dr. Tri-Thien Nguyen, Andreas Maier
Physics-Informed Echo-to-CT Synthesis for 3D LAA Reconstruction	Shivam Chaudhary	Adarsh Raghunath, Andreas Maier
Few shot classification using Patch-CLIP on Mammograms	Mahmoud Afifi	Sheethal Bhat
Extending Patch-CLIP to unsupervised detection	Weijun Dou	Sheethal Bhat
Automated Template Filling for Abdominal CT Reports Using Language Models	Siqi Chen	Lukas Buess, Andreas Maier
Alzheimers subtype classification and analysis	Fayaiz Uddin	Paula Andrea Pérez-Toro, Sheethal Bhat
Analysis of Learning Dynamics in HORN-based Convolutional Neural Networks for Computer Vision	Mariia Svimonishvili	Michael S. Simo, M. Sc.
A Multimodal Foundation Model for Radiation Therapy	Nihal Verma	Annette Schwarz, M. Sc., Lukas Buess, Andreas Maier
Synthetic Data Generation and Deep Learning-Based Object Detection and Segmentation for Interventional Devices in Cardiac and Neurovascular Fluoroscopy	Mersad Shoaei Taklimi	Joshua Scheuplein, Farid Tasharofi, Andreas Maier
Label‑Efficient Stroke Onset Time Estimation via Proxy Tasks on Non‑Contrast CT	Ahmed Hossam Mohamed Khalil	Linda Vorberg, Andreas Maier
Development of a Local LLM Agent System for Clinical Expert Support and Automation in MRI Planning for Radiation Therapy	Ali Bagherzadeh	Annette Schwarz, M. Sc., Andreas Maier
Improving Weak Localization in Chest X-Ray Vision–Language Models Using Anatomy-Aware and Semi-Supervised Refinement	Harshvardhan Agarwal	Sheethal Bhat
Agentic Radiology Report Generation	Muhammad Faizan Kazi	Lukas Buess, Linda-Sophie Schneider, Andreas Maier
A Unified Vision–Language Model for Joint Radiological Image Modalities	Mohamed Hassan Elhassan Mohamed Aly Oraby	Lukas Buess, Andreas Maier
Privacy-Preserving Structured Chest X-Ray Report Generation using Multimodal Large Language Models within a Federated Learning Framework	MD Badhon Miah	Lukas Buess, Andreas Maier
Improved Zero-shot Pathology detection in medical images	Atharv Dharmadhikari	Sheethal Bhat
Latent Diffusion Model for CT Synthesis	Dinuo wei	Chang Liu, Andreas Maier

2026

Journal Articles

Mei S., Thies M., Xia Y., Sun Y., Wu F., Fan F., Gu M., Ye C., Huang Y., Christlein V., Maier A.:
Vision transformer Hook for dense predictions
In: Pattern Recognition 179 (2026), p. 1-12
ISSN: 0031-3203
DOI: 10.1016/j.patcog.2026.113818
URL: https://www.sciencedirect.com/science/article/pii/S0031320326007831?via=ihub
BibTeX: Download
Bhat S., Mansoor A., Georgescu B., B. Panambur A., Zinnen M., C. Ghesu F., Grbic S., Maier A.:
Patch-CLIP - Contrastive Health Record-Image Joint Training with Patch Embedding Loss
In: Scientific Reports (2026), Article No.: 14688
ISSN: 2045-2322
DOI: 10.1038/s41598-026-52235-x
URL: https://www.nature.com/articles/s41598-026-52235-x
BibTeX: Download
Vorberg L., Ditt H., Maier A., Nicolaou S., Murray N., Taubmann O.:
Comparing deep learning stroke segmentation in NCCT, CTA, and CTP: Accuracy, domain transfer, and temporal sampling effect
In: Medical Physics 53 (2026), Article No.: e70419
ISSN: 0094-2405
DOI: 10.1002/mp.70419
BibTeX: Download

Conference Contributions

Bhat S., Georgescu B., Mansoor A., Ghesu FC., Grbic S., Maier A.:
Toward Foundation Detection Models via Example-Based Grounding in EM-DETR
Computer Vision and Image Processing (Punjab, India, December 11, 2025 - December 13, 2025)
In: 10th International Conference on Computer Vision & Image Processing 2026
BibTeX: Download
Chen S., Gong H., Hou k., Yang J., Bhat S., Maier A.:
CT-3GDINO: Pseudo-Text-Conditioned 3D Grounding DINO for Organ Localization in Abdominal CT
BAIOSPHERE (Erlangen, June 8, 2026 - June 9, 2026)
In: Andreas Maier, Siming Bayer, Tri-Thien Nguyen, Sheethal Bhat (ed.): BAIOSPHERE MEDICAL 2026 — Book of Abstracts, Erlangen: 2026
DOI: https://open.fau.de/handle/openfau/40364
URL: https://open.fau.de/handle/openfau/40364
BibTeX: Download
Bhat S., Bayer S., Perez Toro PA., Maier A.:
Exploiting Partially Overlapping Auxiliary Modalities for Alzheimer’s MRI Classification via Prototype Alignment
BAIOSPHERE (Erlangen, June 8, 2026 - June 9, 2026)
In: Andreas Maier, Siming Bayer, Tri-Thien Nguyen, Sheethal Bhat (ed.): BAIOSPHERE MEDICAL 2026 — Book of Abstracts 2026
DOI: https://open.fau.de/handle/openfau/40364
URL: https://open.fau.de/handle/openfau/40364
BibTeX: Download
Bayer L., Bhat S., Maier A.:
Benchmarking CNN-based Models against Transformer-based Models for Abdominal Multi-Organ Segmentation on the RATIC Dataset
BAIOSPHERE (Erlangen, July 8, 2026 - July 9, 2026)
In: Andreas Maier, Siming Bayer, Tri-Thien Nguyen, Sheethal Bhat (ed.): BAIOSPHERE, https://open.fau.de/items/2b0cedf6-52f8-4140-a159-a47b05ae5e84: 2026
DOI: https://open.fau.de/handle/openfau/40364
URL: https://open.fau.de/handle/openfau/40364
BibTeX: Download
(Techreport)
Bhat S., Bayer S., Grbic S., Maier A.:
Robust AI-Based Chest Radiograph Classification Without Prior Task Training via Improved Vision-Language Alignment
European Congress of Radiology (Vienna, March 4, 2026 - March 8, 2026)
In: European Society of Radiologists, ESR: 2026
DOI: 10.26044/ecr2026/C-12946
BibTeX: Download
Raghunath A., Castaneda Gavina E., Jacob A., Weiss M., Voigt I., Passerini T., Mihalef V., Maier A., Lluch È.:
Scalable Automated Framework for Left Atrial Appendage Segmentation, Clustering, and CFD Analysis
16th International Workshop, STACOM 2025, Held in Conjunction with MICCAI 2025 (Daejeon, September 27, 2025 - September 27, 2025)
In: Oscar Camara, Esther Puyol Antón, Maxime Sermesant, Charlène Mauge, Marta Varela, Yingliang Ma, Rasmus Paulsen, Chengyan Wang, Qian Tao, Alistair Young (ed.): Statistical Atlases and Computational Models of the Heart. Regular and CMRxRecon Challenge Papers. STACOM 2025, Cham: 2026
DOI: 10.1007/978-3-032-17734-6_13
BibTeX: Download
Bhandary Panambur A., Nguyen TT., Bayer S., Maier A.:
Breast MRI Evaluation with Weakly-informed Slice-level Explanation
Bildverarbeitung für die Medizin 2026 (Lübeck, March 15, 2026 - March 17, 2026)
DOI: 10.1007/978-3-658-51100-5_2
BibTeX: Download
Weber F., Gorges T., Raghunath A., Maier A.:
Anomaly Detection in Thoracic CT
German Conference on Medical Image Computing (Lübeck, March 15, 2026 - March 17, 2026)
In: Bildverarbeitung für die Medizin 2026 2026
DOI: 10.1007/978-3-658-51100-5_24
BibTeX: Download
Yadav B., Raghunath A., Weber F., Maier A.:
Self-supervised Dual-domain Swin Transformer for Sparse-view CT Reconstruction
German Conference on Medical Image Computing (Lubeck, March 15, 2026 - March 17, 2026)
In: Bildverarbeitung für die Medizin 2026 2026
DOI: 10.1007/978-3-658-51100-5_4
BibTeX: Download
Ni Y., Panambur AB., Liu C., Nguyen TT., Bayer S., Juan H., Jiayu S., Su L., Maier A.:
Opportunistic Breast Cancer Risk Stratification From Low-dose Chest CT Using Multiple Instance Learning
Bildverarbeitung für die Medizin 2026 (BVM 2026) (Lübeck, March 15, 2026 - March 17, 2026)
In: Bildverarbeitung für die Medizin 2026 2026
DOI: 10.1007/978-3-658-51100-5_84
BibTeX: Download
Sun Y., Schneider LS., Schwarz A., Gu M., Mei S., Ye C., Bayer S., Maier A.:
LSTT: Latent Spatio-Temporal Transformer for Non-rigid Motion Compensation in CBCT
1st International Workshop on Reconstruction and Imaging Motion Estimation, RIME 2025, and 7th International Workshop on Graphs in Biomedical Image Analysis, GRAIL 2025, held in conjunction with the 28th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025 (Daejeon, September 27, 2025 - September 27, 2025)
In: Lina Felsner, Thomas Küstner, Andreas Maier, Chen Qin, Seyed-Ahmad Ahmadi, Anees Kazi, Xiaoling Hu (ed.): Lecture Notes in Computer Science 2026
DOI: 10.1007/978-3-032-06103-4_8
BibTeX: Download
Tasharofi F., Fan F., Qahqaie M., Thies M., Maier A.:
FIND-Net – Fourier-Integrated Network with Dictionary Kernels for Metal Artifact Reduction
28th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2025 (Daejeon, KOR, September 23, 2025 - September 27, 2025)
In: James C. Gee, Jaesung Hong, Carole H. Sudre, Polina Golland, Jinah Park, Daniel C. Alexander, Juan Eugenio Iglesias, Archana Venkataraman, Jong Hyo Kim (ed.): Lecture Notes in Computer Science 2026
DOI: 10.1007/978-3-032-05169-1_19
BibTeX: Download
Qahqaie M., Neumann D., Heimann T., Maier A., Zimmer VA.:
Unbalanced optimal transport for robust longitudinal lesion evolution with registration-aware and appearance-guided priors
(2026)
DOI: 10.1109/ISBI61048.2026.11516053
BibTeX: Download
Bhandary Panambur A., Nguyen TT., Bayer S., Maier A.:
Lesion-Aware AI for Mammography: Multi-Dataset Pretraining with ROI-Guided Contrastive Learning and Clinical Image Retrieval
ECR 2026
DOI: 10.26044/ecr2026/C-15780
BibTeX: Download
Chaudhary S., Bhat S., Maier A.:
CT-VDETR: Semi-supervised 3D Trauma Detection in Computed Tomography (CT) scans using Dense Vertex Relative Position Encoding
2026 IEEE NUCLEAR SCIENCE SYMPOSIUM, MEDICAL IMAGING CONFERENCE AND ROOM TEMPERATURE SEMICONDUCTOR DETECTOR CONFERENCE (Granada, November 7, 2026 - November 14, 2026)
In: IEEE Symposium on Nuclear Science (NSS/MIC), In Print: 2026
DOI: 10.48550/arXiv.2603.12514
BibTeX: Download
Bhat S., Maier A.:
Improving Clinical Usability of Deep Learning for Radiographic Diagnosis: Learning under Constraints of Specificity, Data, and Annotation
MICCAI 2025 (Daejeon, South Korea, September 23, 2025 - September 27, 2025)
In: 28th International Conference of Medical Image Computing and Computer Assisted Intervention – MICCAI 2026
BibTeX: Download
Aliakbari Mamaghani Z., Vorberg L., Maier A., Katzmann A., Taubmann O.:
An LLM-Based Active Assistant and Smart Manual for CT Imaging Workflows
1st International Workshop on Emerging LLM/LMM Applications in Medical Imaging, ELAMI 2025, Held in Conjunction with the 28th International conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2025 (Daejeon, September 27, 2025 - September 27, 2025)
In: Hien Van Nguyen, Akash Awasthi, Vishal M. Patel, Ngan Le, Yuyin Zhou, Sheng Liu, S. Kevin Zhou (ed.): Lecture Notes in Computer Science 2026
DOI: 10.1007/978-3-032-07502-4_6
BibTeX: Download
Kang X., Vorberg L., Maier A., Katzmann A., Taubmann O.:
Scan-Do Attitude: Towards Autonomous CT Protocol Management Using a Large Language Model Agent
1st International Workshop on Agentic AI for Medicine, Agentic AI 2025, 1st International Workshop on Clinical-Driven Robotics and Embodied AI Technology, CREATE 2025, and 1st International Workshop on Multimodal Large Language Models in Clinical Practice, CMLLMs 2025, Held in Conjunction with the 28th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2025 (Daejeon, September 23, 2025 - September 27, 2025)
In: Jianing Qiu, Jinlin Wu, Curtis Langlotz, Baoru Huang, Zhen Lei, Honghan Wu, Hongbin Liu, Weidi Xie (ed.): Lecture Notes in Computer Science 2026
DOI: 10.1007/978-3-032-06004-4_5
BibTeX: Download
Bueß L., Kurin R., Panambur AB., Arias-Vergara T., Maier A.:
ALO: Addressing Class Imbalance in Radiology Report Generation through Anatomy-Level Oversampling
9th International Conference on Medical Imaging with Deep Learning, MIDL 2026 (Chientan, TWN, July 8, 2026 - July 10, 2026)
In: Yuankai Huo, Mingchen Gao, Chang-Fu Kuo, Yueming Jin, Ruining Deng (ed.): Proceedings of Machine Learning Research 2026
BibTeX: Download
Perez Toro PA., Arias Vergara T., Bueß L., Hutter J., Woo J., Maier A.:
Cross‑modal diffusion for region‑aligned vocal tract MRI synthesis
DOI: 10.1117/12.3087986
URL: https://www.spiedigitallibrary.org/conference-proceedings-of-spie/13930/3087986/Crossmodal-diffusion-for-regionaligned-vocal-tract-MRI-synthesis/10.1117/12.3087986.short
BibTeX: Download

Unpublished Publications

Bhandary Panambur A., Nguyen TT., Islam S., Uder M., Bickelhaupt S., Maier A., Bayer S.:
BE-WISER: Class-Aware Weak Slice-Level Supervision for Breast MRI
(2026)
DOI: 10.21203/rs.3.rs-9855612/v1
BibTeX: Download
Islam Bhuiyan MR., Bhat S., Qahqaie M., Nguyen TT., Perez-Toro PA., Arias-Vergara T., Maier A.:
LoGSAM: Parameter-Efficient Cross-Modal Grounding for MRI Segmentation (Conference contribution, submitted)
DOI: https://arxiv.org/abs/2603.17576
URL: https://arxiv.org/abs/2603.17576
BibTeX: Download
Kittler F., Bhat S., Maier A.:
ProtoCLIP: Prototype-Aligned Latent Refinement for Robust Zero-Shot Chest X-Ray Classification (Conference contribution, submitted)
Open Access: https://arxiv.org/abs/2604.18444
URL: https://arxiv.org/abs/2604.18444
BibTeX: Download
Zaian A., Bhat S., Abdalkader M., Maier A.:
Retina-RAG: Retrieval-Augmented Vision-Language Modeling for Joint Retinal Diagnosis and Clinical Report Generation (Conference contribution, submitted)
Open Access: https://arxiv.org/abs/2605.06173
URL: https://arxiv.org/abs/2605.06173
BibTeX: Download

2025

Journal Articles

Possart D., Mill L., Vollnhals F., Hildebrand T., Suter P., Hoffmann M., Utz J., Augsburger D., Thies M., Gu M., Wagner F., Sarau G., Christiansen S., Breininger K.:
Addressing data scarcity in nanomaterial segmentation networks with differentiable rendering and generative modeling
In: npj Computational Materials 11 (2025), Article No.: 197
ISSN: 2057-3960
DOI: 10.1038/s41524-025-01702-6
BibTeX: Download
Ravi A., Bernhardt P., Hoffmann M., Kordon F., Bayer S., Achenbach S., Maier A.:
Deep learning-based classification of coronary arteries and left ventricle using multimodal data for autonomous protocol selection or adjustment in angiography
In: Scientific Reports 15 (2025), Article No.: 15186
ISSN: 2045-2322
DOI: 10.1038/s41598-025-99651-z
BibTeX: Download
Wind S., Sopa J., Truhn D., Lotfinia M., Nguyen TT., Bressem K., Adams L., Rusu M., Köstler H., Wellein G., Maier A., Tayebi Arasteh S.:
Multi-step retrieval and reasoning improves radiology question answering with large language models
In: npj Digital Medicine 8 (2025), Article No.: 790
ISSN: 2398-6352
DOI: 10.1038/s41746-025-02250-5
URL: https://www.nature.com/articles/s41746-025-02250-5
BibTeX: Download
Mayr M., Dreier MN., Kordon F., Seuret M., Zöllner J., Wu F., Maier A., Christlein V.:
Zero-Shot Paragraph-level Handwriting Imitation with Latent Diffusion Models
In: International Journal of Computer Vision 133 (2025), p. 7054-7075
ISSN: 0920-5691
DOI: 10.1007/s11263-025-02525-0
URL: https://link.springer.com/article/10.1007/s11263-025-02525-0
BibTeX: Download
Wu F., Seuret M., Mayr M., Kordon F., Zöllner J., Wind S., Maier A., Christlein V.:
Lightweight cross-attention-based HookNet for historical handwritten document layout analysis
In: International Journal on Document Analysis and Recognition 28 (2025), p. 409-427
ISSN: 1433-2833
DOI: 10.1007/s10032-025-00519-9
URL: https://link.springer.com/article/10.1007/s10032-025-00519-9
BibTeX: Download
Bhandary Panambur A., Bhat S., Yu H., Madhu P., Bayer S., Maier A.:
Attention-guided erasing for enhanced transfer learning in breast abnormality classification
In: International Journal of Computer Assisted Radiology and Surgery (2025)
ISSN: 1861-6410
DOI: 10.1007/s11548-024-03317-6
BibTeX: Download
Mayr M., Neumeier K., Krenz J., Bürcky S., Kordon F., Seuret M., Zöllner J., Wu F., Maier A., Christlein V.:
Data-efficient handwritten text recognition of diplomatic historical text
In: Multimedia Tools and Applications (2025)
ISSN: 1380-7501
DOI: 10.1007/s11042-024-20545-9
URL: https://link.springer.com/article/10.1007/s11042-024-20545-9
BibTeX: Download
Mei S., Fan F., Thies M., Gu M., Wagner F., Aust O., Erceg I., Mirzaei Z., Neag G., Sun Y., Huang Y., Maier A.:
BigReg: an efficient registration pipeline for high-resolution X-ray and light-sheet fluorescence microscopy
In: Journal of Medical Imaging (2025)
ISSN: 2329-4310
DOI: 10.1117/1.JMI.12.5.054004
BibTeX: Download
Sun Y., Huang Y., Yang Z., Schneider LS., Thies M., Gu M., Mei S., Bayer S., Zöllner FG., Maier A.:
EAGLE: an edge-aware gradient localization enhanced loss for CT image reconstruction
In: Journal of Medical Imaging 12 (2025), Article No.: 014001
ISSN: 2329-4310
DOI: 10.1117/1.JMI.12.1.014001
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Schwarz A., Hofmann C., Dickmann J., Simon A., Maier A., Wacker FK., Raatschen HJ., Gleitz S., Schmidbauer M.:
Free-Breathing Respiratory Triggered High-Pitch Lung CT: Insights from Phantom and Patient Scans
In: Investigative Radiology (2025), Article No.: 10.1097/RLI.0000000000001157
ISSN: 0020-9996
DOI: 10.1097/RLI.0000000000001157
BibTeX: Download
Bueß L., Keicher M., Navab N., Maier A., Tayebi Arasteh S.:
From large language models to multimodal AI: a scoping review on the potential of generative AI in medicine
In: Biomedical Engineering Letters (2025)
ISSN: 2093-9868
DOI: 10.1007/s13534-025-00497-1
BibTeX: Download

Conference Contributions

Tasharofi F., Fan F., Maier A.:
Frequency-Aware Proximal Networks with Fourier Channel Attention for CT Metal Artifact Reduction
2025 IEEE Nuclear Science Symposium (NSS), Medical Imaging Conference (MIC) and Room Temperature Semiconductor Detector Conference (RTSD) (Yokohama, November 1, 2025 - November 8, 2025)
DOI: 10.1109/NSS/MIC/RTSD57106.2025.11287516
BibTeX: Download
Bhandary Panambur A., Wind S., Bayer S., Maier A.:
MammoBLIP: End-to-End Mammography Report Generation with Vision-Language Models and Public Multi-Institutional Datasets
IEEE Symposium on Nuclear Science (NSS/MIC) (Yokohama, November 1, 2025 - November 8, 2025)
In: 2025 IEEE Nuclear Science Symposium (NSS), Medical Imaging Conference (MIC) and Room Temperature Semiconductor Detector Conference (RTSD) 2025
DOI: 10.1109/NSS/MIC/RTSD57106.2025.11286311
BibTeX: Download
Mosig D., Marwan M., Achenbach S., Maier A.:
Coronary Artery Classification Using Deep Learning
2025 IEEE Nuclear Science Symposium (NSS), Medical Imaging Conference (MIC) and Room Temperature Semiconductor Detector Conference (RTSD) (Yokohama, November 1, 2025 - November 8, 2025)
DOI: 10.1109/NSS/MIC/RTSD57106.2025.11287049
BibTeX: Download
Vorberg L., Rist L., Ditt H., Maier A., Taubmann O.:
Leveraging Last-Known-Well Times for Radiomics-Based Stroke Onset Estimation from Non-contrast CT
5th International Workshop SWITCH 2025 (Daejeon, September 23, 2025 - September 23, 2025)
In: Image Analysis in Stroke Diagnosis and Interventions, Cham: 2025
DOI: 10.1007/978-3-032-07945-9_6
BibTeX: Download
Weber F., Belanche-Muñoz L., Maier A.:
Impact of Plasticity-Based Reservoir Adaptation on Spectral Radius and Performance of ESNs
34th International Conference on Artificial Neural Networks (Kaunas, September 9, 2025 - September 12, 2025)
In: Artificial Neural Networks and Machine Learning. ICANN 2025 International Workshops and Special Sessions 2025
DOI: 10.1007/978-3-032-04552-2_16
BibTeX: Download
Elbarbary K., Bhandary Panambur A., Bhat S., Bayer S., Maier A.:
MM-DETR: Emulating the Diagnostic Clinical Workflow in Multi-view Multi-modal Mammography Mass Detection
MICCAI Deep Breath Workshop (Daejeon, South Korea, September 23, 2025 - September 27, 2025)
In: Artificial Intelligence and Imaging for Diagnostic and Treatment Challenges in Breast Care 2025
DOI: 10.1007/978-3-032-05559-0_26
URL: https://link.springer.com/chapter/10.1007/978-3-032-05559-0_26
BibTeX: Download
Bhat S., Georgescu B., Bhandary Panambur A., Zinnen M., Nguyen TT., Mansoor A., Elbarbary K., Bayer S., Ghesu FC., Grbic S., Maier A.:
Exemplar Med-DETR: Toward Generalized and Robust Lesion Detection in Mammogram Images and Beyond
MICCAI (Daejeon, September 23, 2025 - September 27, 2025)
In: 28th International Conference of Medical Image Computing and Computer Assisted Intervention – MICCAI 2025
DOI: 10.1007/978-3-032-04978-0_20
URL: https://link.springer.com/chapter/10.1007/978-3-032-04978-0_20#chapter-info
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Madhipati R., Bhat S., Bueß L., Maier A.:
CXR-CML: Improved Zero-Shot Classification of Long-Tailed Multi-label Diseases in Chest X-Rays
MICCAI 2025 (Daejeon, September 23, 2025 - September 27, 2025)
In: 28th International Conference of Medical Image Computing and Computer Assisted Intervention – MICCAI 2025
DOI: 10.1007/978-3-032-04978-0_20
URL: https://link.springer.com/chapter/10.1007/978-3-032-04981-0_12#chapter-info
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Sun Y., Schneider LS., Ye C., Gu M., Mei S., Bayer S., Maier A.:
Learning Wavelet-Sparse FDK for 3D Cone-Beam CT Reconstruction
International Conference on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (, May 27, 2025 - May 30, 2025)
BibTeX: Download
Baum S., Wohlfahrt P.:
4458 Robustness of automatic organ segmentation on various image contrasts from photon-counting CT
ESTRO 2025
BibTeX: Download
Schwarz A., Schmidt S., Wohlfahrt P., Dickmann J., Maier A.:
Trainable Spatio-Temporal Bilateral Filters: 4D-Filtering for 4DCT Denoising
Medical Imaging 2025: Physics of Medical Imaging (San Diego, CA, February 17, 2025 - February 21, 2025)
In: John M. Sabol, Ke Li, Shiva Abbaszadeh (ed.): Medical Imaging 2025: Physics of Medical Imaging 2025
DOI: 10.1117/12.3047389
BibTeX: Download
Liu C., Fan F., Schwarz A., Maier A.:
Anatomy-aware Data Augmentation for Multi-organ Segmentation in CT: AnatoMix
German Conference on Medical Image Computing, 2025 (Regensburg, March 9, 2025 - March 11, 2025)
In: Christoph Palm, Katharina Breininger, Thomas Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Thomas M. Tolxdorff (ed.): Bildverarbeitung für die Medizin 2025. Proceedings, German Conference on Medical Image Computing, Regensburg March 09-11, 2025, Wiesbaden: 2025
DOI: 10.1007/978-3-658-47422-5_29
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George A., Schreiter H., Hoßbach J., Nguyen TT., Horishnyi I., Ehring C., Heidarikahkesh S., Kapsner L., Laun FB., Uder M., Ohlmeyer S., Bickelhaupt S., Liebert A.:
U-Net and GAN for Virtual Contrast in Breast MRI: How Do They Compare to Real Contrast Images?
German Conference on Medical Image Computing, 2025 (Regensburg, March 9, 2025 - March 11, 2025)
In: Christoph Palm, Katharina Breininger, Thomas Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Thomas M. Tolxdorff (ed.): Bildverarbeitung für die Medizin 2025. Proceedings, German Conference on Medical Image Computing, Regensburg March 09-11, 2025, Cham: 2025
DOI: 10.1007/978-3-658-47422-5_63
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Bharadwaj P., Bhat S., Maier A.:
Enhancing Zero-Shot Learning in Chest X-ray Diagnostics Using BioBERT for Textual Representation
Bildverarbeitung für die Medizin 2025 (Regensburg, March 9, 2025 - March 11, 2025)
BibTeX: Download
Bhat S., B. Panambur A., Mansoor A., Georgescu B., Ghesu FC., Grbic S., Maier A.:
Towards robust zero-shot Chest X-Ray (CXR) classification: Exploring data distribution bias in CXR datasets
Bildverarbeitung für die Medizin 2025 (Regensburg, March 9, 2025 - March 11, 2025)
BibTeX: Download
Vorberg L., Ditt H., Sühling M., Maier A., Murray N., Nicolaou S., Taubmann O.:
Bayesian Uncertainty Estimation Improves nnU-Net Generalization to Unseen Sites for Stroke Lesion Segmentation
4th International Workshop, SWITCH 2024, and 6th International Challenge, ISLES 2024 (Marrakesh, October 10, 2024 - October 10, 2024)
In: Image Analysis in Stroke Diagnosis and Interventions, Cham: 2025
DOI: 10.1007/978-3-031-81101-2_3
BibTeX: Download
Vorberg L., Ditt H., Sühling M., Maier A., Murray N., Nicolaou S., Taubmann O.:
Usefulness of Monoenergetic Non-contrast CT and X-Map Images for Deep Learning-Based Stroke Lesion Segmentation
4th International Workshop, SWITCH 2024, and 6th International Challenge, ISLES 2024 (Marrakesh, October 10, 2024 - October 10, 2024)
In: Ruisheng Su, Ezequiel de la Rosa, Leonhard Rist, Ewout Heylen, Frank te Nijenhuis, Danny Ruijters, Markus D. Schirmer, Richard McKinley, Susanne Wegener, Roland Wiest, Theo van Walsum (ed.): Image Analysis in Stroke Diagnosis and Interventions, Cham: 2025
DOI: 10.1007/978-3-031-81101-2_4
BibTeX: Download
Sun Y., Sun Y., Schneider LS., Schwarz A., Gu M., Mei S., Ye C., Bayer S., Maier A.:
LSTT: Latent Spatio-Temporal Transformer for Non-rigid Motion Compensation in CBCT
In: International Workshop on Reconstruction and Imaging Motion Estimation 2025
BibTeX: Download
Schwarz A., Dickmann J., Hofmann C., Szkitsak J., Bert C., Maier A., Arias Vergara T.:
Cross-Modality Image Quality Prediction for Time-Resolved CT from Breathing Signals
Workshop on Longitudinal Disease Tracking and Modeling with Medical Images and Data, LDTM 2024, 5th International Workshop on Multiscale Multimodal Medical Imaging, MMMI 2024, 1st Workshop on Machine Learning for Multimodal/-sensor Healthcare Data, ML4MHD2024 and Workshop on Multimodal Learning and Fusion Across Scales for Clinical Decision Support, ML-CDS 2024 held in conjunction with the 27th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2024 (Marrakesh, October 6, 2024 - October 10, 2024)
In: Anna Schroder, Xiang Li, Tanveer Syeda-Mahmood, Neil P. Oxtoby, Alexandra Young, Alessa Hering, Tejas S. Mathai, Pritam Mukherjee, Sven Kuckertz, Tiantian He, Isaac Llorente-Saguer, Andreas Maier, Satyananda Kashyap, Hayit Greenspan, Anant Madabhushi (ed.): Lecture Notes in Computer Science 2025
DOI: 10.1007/978-3-031-84525-3_13
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Miscellaneous

Badawi M., Mohammedyahia A., Bhat S., Maier A.:
Review of Zero-Shot and Few-Shot AI Algorithms in The Medical Domain
(2025)
Open Access: https://arxiv.org/abs/2406.16143
BibTeX: Download
(online publication)
Ansari M., Bhat S., Maier A.:
Evaluating Stenosis Detection with Grounding DINO, YOLO, and DINO-DETR
(2025)
Open Access: https://arxiv.org/abs/2503.01601
BibTeX: Download
(online publication)
Bharadwaj P., Bhat S., Maier A.:
Enhancing zero-shot learning in medical imaging: integrating clip with advanced techniques for improved chest x-ray analysis
(2025)
Open Access: https://arxiv.org/abs/2503.13134
BibTeX: Download
(online publication)

2024

Journal Articles

Schottenhamml J., Würfl T., Ploner S., Husvogt L., Lämmer R., Hohberger B., Maier A., Mardin C.:
Glaucoma detection using non-perfused areas in OCTA
In: Scientific Reports 14 (2024), Article No.: 10306
ISSN: 2045-2322
DOI: 10.1038/s41598-024-60839-4
BibTeX: Download
Nguyen TT., Folle L., Bayer T.:
Detection of femoropopliteal arterial steno-occlusion at MR angiography: initial experience with artificial intelligence
In: European Radiology Experimental 8 (2024), Article No.: 30
ISSN: 2509-9280
DOI: 10.1186/s41747-024-00433-5
BibTeX: Download
Thies M., Wagner F., Maul N., Yu H., Goldmann M., Schneider LS., Gu M., Mei S., Folle L., Preuhs A., Manhart M., Maier A.:
A gradient-based approach to fast and accurate head motion compensation in cone-beam CT
In: IEEE Transactions on Medical Imaging (2024), p. 1-1
ISSN: 0278-0062
DOI: 10.1109/TMI.2024.3474250
BibTeX: Download
Husvogt L., Yaghy A., Camacho A., Lam K., Schottenhamml J., Ploner S., Fujimoto JG., Waheed NK., Maier A.:
Ensembling U-Nets for microaneurysm segmentation in optical coherence tomography angiography in patients with diabetic retinopathy
In: Scientific Reports 14 (2024), Article No.: 21520
ISSN: 2045-2322
DOI: 10.1038/s41598-024-72375-2
URL: https://rdcu.be/dT0FK
BibTeX: Download
Schottenhamml J., Würfl T., Ploner S., Husvogt L., Lämmer R., Hohberger B., Maier A., Mardin C.:
Impact of acquisition area on deep-learning-based glaucoma detection in different plexuses in OCTA
In: Scientific Reports 14 (2024), Article No.: 20414
ISSN: 2045-2322
DOI: 10.1038/s41598-024-71235-3
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Islam S., Murthy VN., Neumann D., Das B., Sharma P., Maier A., Comaniciu D., Ghesu FC.:
Self-supervised learning for interventional image analytics: toward robust device trackers
In: Journal of Medical Imaging 11 (2024), Article No.: 035001
ISSN: 2329-4310
DOI: 10.1117/1.JMI.11.3.035001
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Das B., Zhao G., Islam S., Re TJ., Comaniciu D., Maier A., Gibson E.:
Co-ordinate-based positional embedding that captures resolution to enhance transformer’s performance in medical image analysis
In: Scientific Reports 14 (2024), Article No.: 9380
ISSN: 2045-2322
DOI: 10.1038/s41598-024-59813-x
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Privalov M., Kordon F., Kunze H., Beisemann N., Vetter SY., Franke J., Grützner PA., Swartman B.:
Software‐based method for automated intraoperative planning of Schoettle Point in surgical medial patellofemoral ligament reconstruction: A comparative validation study
In: International Journal of Medical Robotics and Computer Assisted Surgery 20 (2024)
ISSN: 1478-5951
DOI: 10.1002/rcs.2607
BibTeX: Download
Mattick A., Mayr M., Seuret M., Kordon F., Wu F., Christlein V.:
Evaluating learned feature aggregators for writer retrieval
In: International Journal on Document Analysis and Recognition 27 (2024), p. 265-274
ISSN: 1433-2833
DOI: 10.1007/s10032-024-00482-x
URL: https://link.springer.com/article/10.1007/s10032-024-00482-x
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Hagen F., Vorberg L., Thamm F., Ditt H., Maier A., Brendel JM., Ghibes P., Bongers MN., Krumm P., Nikolaou K., Horger M.:
Improved detection of small pulmonary embolism on unenhanced computed tomography using an artificial intelligence-based algorithm – a single centre retrospective study
In: International Journal of Cardiovascular Imaging (2024)
ISSN: 1569-5794
DOI: 10.1007/s10554-024-03222-8
BibTeX: Download

Conference Contributions

Gu M., Thies M., Mei S., Wagner F., Fan M., Sun Y., Pan Z., Vesal S., Kosti RV., Possart D., Utz J., Maier A.:
Unsupervised Domain Adaptation Using Soft-Labeled Contrastive Learning with Reversed Monte Carlo Method for Cardiac Image Segmentation
27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 (Marrakesh, October 6, 2024 - October 10, 2024)
In: Marius George Linguraru, Qi Dou, Aasa Feragen, Stamatia Giannarou, Ben Glocker, Karim Lekadir, Julia A. Schnabel (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. 27th International Conference, Marrakesh, Morocco, October 6–10, 2024, Proceedings, Part IX, Cham: 2024
DOI: 10.1007/978-3-031-72114-4_65
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Thies M., Maul N., Mei S., Pfaff L., Vysotskaya N., Gu M., Utz J., Possart D., Folle L., Wagner F., Maier A.:
Differentiable Score-Based Likelihoods: Learning CT Motion Compensation from Clean Images
Medical Image Computing and Computer Assisted Intervention – MICCAI 2024
In: Medical Image Computing and Computer Assisted Intervention – MICCAI 2024, Cham: 2024
DOI: 10.1007/978-3-031-72104-5_25
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Bracci J., Capobianco N., Shah V., Spottiswoode B., Giobergia F.:
Label extraction from PET/CT reports using Large Language Models
Annual Congress of the European Association of Nuclear Medicine (Hamburg, Germany, October 19, 2024 - October 23, 2024)
In: EANM’24 Abstract Book Congress 2024
DOI: 10.1007/s00259-024-06939-9
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Weber F., Toddenroth D.:
Comparative Evaluation of Pre-Trained Language Models for Biomedical Information Retrieval
34th Medical Informatics Europe Conference, MIE 2024 (Athens, August 25, 2024 - August 29, 2024)
In: John Mantas, Arie Hasman, George Demiris, Kaija Saranto, Michael Marschollek, Theodoros N. Arvanitis, Ivana Ognjanovic, Arriel Benis, Parisis Gallos, Emmanouil Zoulias, Elisavet Andrikopoulou (ed.): Studies in Health Technology and Informatics 2024
DOI: 10.3233/SHTI240539
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Mei S., Fan F., Wagner F., Thies M., Gu M., Sun Y., Maier A.:
Segmentation-Guided Knee Radiograph Generation using Conditional Diffusion Models
The 8th International Conference on Image Formation in X-Ray Computed Tomography (Bamberg, Germany, August 5, 2024 - August 9, 2024)
DOI: 10.48550/arXiv.2404.03541
URL: https://arxiv.org/pdf/2404.03541
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Sun Y., Schneider LS., Fan F., Thies M., Gu M., Mei S., Zhou Y., Bayer S., Maier A.:
Data-Driven Filter Design in FBP: Transforming CT Reconstruction with Trainable Fourier Series
(2024)
DOI: 10.48550/arXiv.2401.16039
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Bhandary Panambur A., Madhu P., Bayer S., Maier A.:
Enhancing downstream classification of breast abnormalities in contrast enhanced spectral mammography using a neighborhood representation loss
SPIE Medical Imaging 2024 (San Diego, February 18, 2024 - February 23, 2024)
In: Weijie Chen, Susan M. Astley (ed.): Medical Imaging 2024: Computer-Aided Diagnosis 2024
DOI: 10.1117/12.3004102
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Thies M., Wagner F., Gu M., Mei S., Huang Y., Pechmann S., Aust O., Weidner D., Neag G., Uderhardt S., Schett G., Christiansen S., Maier A.:
Exploring Epipolar Consistency Conditions for Rigid Motion Compensation in In-vivo X-ray Microscopy
German Conference on Medical Image Computing, BVM 2024 (Erlangen, March 10, 2024 - March 12, 2024)
In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024. BVM 2024, Wiesbaden: 2024
DOI: 10.1007/978-3-658-44037-4_60
URL: https://arxiv.org/abs/2303.00449
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Packhäuser K., Folle L., Nguyen TT., Thamm F., Maier A.:
Privacy-enhancing Image Sampling for the Synthesis of High-quality Anonymous Chest Radiographs
German Conference on Medical Image Computing, BVM 2024 (Erlangen, March 10, 2024 - March 12, 2024)
In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024. BVM 2024, Wiesbaden: 2024
DOI: 10.1007/978-3-658-44037-4_12
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Vorberg L., Taubmann O., Ditt H., Maier A.:
Segmentation of Acute Ischemic Stroke in Native and Enhanced CT using Uncertainty-aware Labels
German Conference on Medical Image Computing, BVM 2024 (Erlangen, March 10, 2024 - March 12, 2024)
In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024. BVM 2024, Wiesbaden: 2024
DOI: 10.1007/978-3-658-44037-4_72
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Bhandary Panambur A., Yu H., Bhat S., Madhu P., Bayer S., Maier A.:
Attention-guided Erasing
Bildverarbeitung für die Medizin 2024 (Erlangen, March 10, 2024 - March 12, 2024)
In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024, Wiesbaden: 2024
DOI: 10.1007/978-3-658-44037-4_8
BibTeX: Download
Thies M., Wagner F., Maul N., Mei S., Gu M., Pfaff L., Vysotskaya N., Yu H., Maier A.:
On the influence of smoothness constraints in computed tomography motion compensation
8th International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting) (Bamberg, August 5, 2024 - August 9, 2024)
URL: https://www.ct-meeting.org/?p=program
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Liu C., Fan F., Schwarz A., Maier A.:
Cut to the Mix: Simple Data Augmentation Outperforms Elaborate Ones in Limited Organ Segmentation Datasets
27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 (Marrakesh, MAR, October 6, 2024 - October 10, 2024)
In: Marius George Linguraru, Qi Dou, Aasa Feragen, Stamatia Giannarou, Ben Glocker, Karim Lekadir, Julia A. Schnabel (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2024
DOI: 10.1007/978-3-031-72111-3_14
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Kordon F., Weichselbaumer N., Herz R., van der Loop J., Mossman S., Potten E., Seuret M., Mayr M., Wu F., Christlein V.:
fang: Fast Annotation of Glyphs in Historical Printed Documents
16th IAPR International Workshop on Document Analysis Systems, DAS 2024 (Athens, August 30, 2024 - August 31, 2024)
In: Giorgos Sfikas, George Retsinas (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2024
DOI: 10.1007/978-3-031-70442-0_23
URL: https://link.springer.com/chapter/10.1007/978-3-031-70442-0_23
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van der Loop J., Kordon F., Mayr M., Christlein V., Wu F., Rodriguez Salas D., Weichselbaumer N., Seuret M.:
ICDAR 2024 Competition on Multi Font Group Recognition and OCR
18th International Conference on Document Analysis and Recognition, ICDAR 2024 (Athens, GRC, August 30, 2024 - September 4, 2024)
In: Elisa H. Barney Smith, Marcus Liwicki, Liangrui Peng (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2024
DOI: 10.1007/978-3-031-70552-6_23
URL: https://link.springer.com/chapter/10.1007/978-3-031-70552-6_23
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Bueß L., Stollenga M., Schinz D., Wiestler B., Kirschke J., Maier A., Navab N., Keicher M.:
Video-CT MAE: Self-supervised Video-CT Domain Adaptation for Vertebral Fracture Diagnosis
International Conference on Medical Imaging with Deep Learning (MIDL) 2024 (Paris, July 3, 2024 - July 5, 2024)
In: Ninon Burgos, Caroline Petitjean, Maria Vakalopoulou, Stergios Christodoulidis, Pierrick Coupe, Hervé Delingette, Carole Lartizien, Diana Mateus (ed.): Proceedings of MIDL 2024 2024
Open Access: https://openreview.net/pdf?id=shuwpLaOJP
URL: https://proceedings.mlr.press/v250/
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Miscellaneous

Bhandary Panambur A.:
Enhancing mammography screening sensitivity with AI-assistance: Evidence from a Vietnamese study cohort
(2024)
DOI: 10.26044/ecr2024/C-16214
BibTeX: Download
(anderer)

2023

Journal Articles

Bhat S., Mansoor A., Georgescu B., Bhandary Panambur A., Ghesu FC., Islam S., Packhäuser K., Rodriguez Salas D., Grbic S., Maier A.:
AUCReshaping: improved sensitivity at high-specificity
In: Scientific Reports 13 (2023), Article No.: 21097
ISSN: 2045-2322
DOI: 10.1038/s41598-023-48482-x
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Thies M., Wagner F., Maul N., Folle L., Meier M., Rohleder M., Schneider LS., Pfaff L., Gu M., Utz J., Denzinger F., Manhart M., Maier A.:
Gradient-based geometry learning for fan-beam CT reconstruction
In: Physics in Medicine and Biology 68 (2023), Article No.: 205004
ISSN: 0031-9155
DOI: 10.1088/1361-6560/acf90e
URL: https://iopscience.iop.org/article/10.1088/1361-6560/acf90e
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Kordon F., Stiglmayr M., Maier A., Martín Vicario C., Pertlwieser T., Kunze H.:
A principled representation of elongated structures using heatmaps
In: Scientific Reports 13 (2023), Article No.: 15253
ISSN: 2045-2322
DOI: 10.1038/s41598-023-41221-2
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Kordon F., Weichselbaumer N., Herz R., Mossman S., Potten E., Seuret M., Mayr M., Christlein V.:
Classification of incunable glyphs and out-of-distribution detection with joint energy-based models
In: International Journal on Document Analysis and Recognition (2023)
ISSN: 1433-2833
DOI: 10.1007/s10032-023-00442-x
BibTeX: Download
Doerrich S., Kordon F., Denzinger F., El Barbari JS., Privalov M., Vetter SY., Maier A., Kunze H.:
Fast 3D YOLOv3 based standard plane regression of vertebral bodies in intra-operative CBCT volumes
In: Journal of Medical Imaging 10 (2023)
ISSN: 2329-4310
DOI: 10.1117/1.JMI.10.3.034503
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Schwarz A., Werner R., Wimmert L., Vornehm M., Gauer T., Hofmann C.:
Dose reduction in sequence scanning 4D CT imaging through respiratory signal-guided tube current modulation: A feasibility study
In: Medical Physics 50 (2023), p. 7539-7547
ISSN: 0094-2405
DOI: 10.1002/mp.16785
BibTeX: Download

Conference Contributions

Vorberg L., Pflüger S., Richer R., Jäger K., Küderle A., Rohleder N., Eskofier B.:
Prediction of Stress Coping Capabilities from Nightly Heart Rate Patterns using Machine Learning
2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) (Pittsburgh, October 15, 2023 - October 18, 2023)
In: 2023 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI) 2023
DOI: 10.1109/BHI58575.2023.10313401
URL: https://www.mad.tf.fau.de/files/2023/12/vorberg_pflueger23_stress_coping_nightly_hr.pdf
BibTeX: Download
Yu H., Forster F., Bhandary Panambur A., Merino A., Maier A., Marquardt G.:
UNSTAINED WHITE BLOOD CELL CLASSIFICATION USING DEEP LEARNING
XXXVIth International Symposium on Technical Innovations in Laboratory Hematology (New Orleans, LA, May 11, 2023 - May 13, 2023)
In: Abstracts of International Society for Laboratory Hematology XXXVIth International Symposium on Technical Innovations in Laboratory Hematology 2023
DOI: 10.1111/ijlh.14149
URL: https://onlinelibrary.wiley.com/doi/10.1111/ijlh.14149
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Denzinger F., Wels M., Taubmann O., Kordon F., Wagner F., Mehltretter S., Gülsün MA., Schöbinger M., André F., Buß SJ., Görich J., Sühling M., Maier A., Breininger K.:
Handling Label Uncertainty on the Example of Automatic Detection of Shepherd’s Crook RCA in Coronary CT Angiography
2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (Cartagena, April 18, 2023 - April 21, 2023)
In: Proceedings - International Symposium on Biomedical Imaging 2023
DOI: 10.1109/ISBI53787.2023.10230565
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Zenk J., Kordon F., Mayr M., Seuret M., Christlein V.:
Investigations on Self-supervised Learning for Script-, Font-type, and Location Classification on Historical Documents
7th International Workshop on Historical Document Imaging and Processing, HIP 2023, held in conjunction with ICDAR 2023 (San Jose, CA, August 25, 2023 - August 26, 2023)
In: ACM International Conference Proceeding Series 2023
DOI: 10.1145/3604951.3605519
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Schuster B., Kordon F., Mayr M., Seuret M., Jost S., Kessler J., Christlein V.:
Multi-stage Fine-Tuning Deep Learning Models Improves Automatic Assessment of the Rey-Osterrieth Complex Figure Test
Document Analysis and Recognition - ICDAR 2023 (San José, CA)
In: Fink, G.A., Jain, R., Kise, K., Zanibbi, R. (ed.): Document Analysis and Recognition - ICDAR 2023, Cham: 2023
DOI: 10.1007/978-3-031-41676-7_1
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Carriere G., Nikolaidou K., Kordon F., Mayr M., Seuret M., Christlein V.:
Beyond Human Forgeries: An Investigation into Detecting Diffusion-Generated Handwriting
ICDAR 2023: Document Analysis and Recognition (San José, CA, August 24, 2023 - August 26, 2023)
In: Mickael Coustaty, Alicia Fornés (ed.): Document Analysis and Recognition – ICDAR 2023 Workshops, Cham: 2023
DOI: 10.1007/978-3-031-41498-5_1
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Ploner S., Won J., Yaghy A., Lam K., Girgis JM., Schottenhamml J., Husvogt L., Waheed NK., Fujimoto JG., Maier A.:
Advanced volume rebuilding overcomes quilting, stretching, and banding image artifacts in orthogonally-scanned OCT
Arvo Annual Meeting 2023 (New Orleans)
In: Investigative Ophthalmology & Visual Science 2023
Open Access: https://iovs.arvojournals.org/article.aspx?articleid=2789933
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Schottenhamml J., Würfl T., Ploner S., Husvogt L., Maier A., Hohberger B., Mardin C.:
Impact of acquisition area on deep-learning-based glaucoma detection in OCTA
ARVO annual meeting 2023 (New Orleans)
In: Investigative Ophthalmology & Visual Science 2023
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Raghunath A., Wagner F., Thies M., Gu M., Pechmann S., Aust O., Weidner D., Neag G., Schett G., Christiansen SH., Uderhardt S., Maier A.:
Unsupervised Super Resolution in X-ray Microscopy using a Cycle-consistent Generative Model
BVM Workshop Bildverarbeitung für die Medizin 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
In: Bildverarbeitung für die Medizin 2023 2023
DOI: 10.1007/978-3-658-41657-7_19
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Querfurth Av., Kordon F., Denzinger F., Breininger K., Kunze H.:
Lung, Nodule and Airway Segmentation Using Partially Annotated Data
Medical Imaging 2023: Image-Guided Procedures, Robotic Interventions, and Modeling (San Diego, CA, February 19, 2023 - February 23, 2023)
In: Cristian A. Linte, Jeffrey H. Siewerdsen (ed.): Medical Imaging 2023: Image-Guided Procedures, Robotic Interventions, and Modeling, Bellingham, WA: 2023
DOI: 10.1117/12.2653419
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Gu M., Thies M., Wagner F., Pechmann S., Aust O., Weidner D., Neag G., Pan Z., Utz J., Schett G., Christiansen S., Uderhardt S., Maier A.:
Cavity Segmentation in X-ray Microscopy Scans of Mouse Tibiae
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_56
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Utz J., Weise T., Schlereth M., Wagner F., Thies M., Gu M., Uderhardt S., Breininger K.:
Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN
2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 (Paris, October 2, 2023 - October 6, 2023)
In: Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 2023
DOI: 10.1109/ICCVW60793.2023.00417
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Utz J., Schlereth M., Qiu J., Thies M., Wagner F., Brahim OB., Gu M., Uderhardt S., Breininger K.:
McLabel: A Local Thresholding Tool for Efficient Semi-automatic Labelling of Cells in Fluorescence Microscopy
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_20
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Wagner F., Thies M., Pfaff L., Maul N., Pechmann S., Gu M., Utz J., Aust O., Weidner D., Neag G., Uderhardt S., Choi JH., Maier A.:
Noise2Contrast: Multi-contrast Fusion Enables Self-supervised Tomographic Image Denoising
28th International Conference on Information Processing in Medical Imaging, IPMI 2023 (San Carlos de Bariloche, ARG, June 18, 2023 - June 23, 2023)
In: Alejandro Frangi, Marleen de Bruijne, Demian Wassermann, Nassir Navab (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-34048-2_59
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Wagner F., Thies M., Pfaff L., Aust O., Pechmann S., Weidner D., Maul N., Rohleder M., Gu M., Utz J., Denzinger F., Maier A.:
On the Benefit of Dual-Domain Denoising in a Self-Supervised Low-Dose CT Setting
20th IEEE International Symposium on Biomedical Imaging, ISBI 2023 (Cartagena, April 18, 2023 - April 21, 2023)
In: Proceedings - International Symposium on Biomedical Imaging 2023
DOI: 10.1109/ISBI53787.2023.10230511
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Ploner S., Chen S., Won J., Husvogt L., Breininger K., Schottenhamml J., Fujimoto JG., Maier A.:
Abstract: A Spatiotemporal Model for Precise and Efficient Fully-automatic 3D Motion Correction in OCT
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_57
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Rabe F., Weber F.:
Morphism Equality in Theory Graphs
Proceedings of the 16th Conference on Intelligent Computer Mathematics, CICM 2023 (Cambridge, GBR, September 5, 2023 - September 8, 2023)
In: Catherine Dubois, Manfred Kerber (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-42753-4_12
BibTeX: Download
Castaneda Gavina E., Suzuki M., Ashikaga H., Lluch È., Meister F., Mihalef V., Audigier C., Maier A., Halperin H., Passerini T.:
Virtual Heart Models Help Elucidate the Role of Border Zone in Sustained Monomorphic Ventricular Tachycardia
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, CAN, October 8, 2023 - October 12, 2023)
In: Hayit Greenspan, Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43990-2_21
BibTeX: Download
Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Abstract: Deep Geometric Supervision Improves Spatial Generalization in Orthopedic Surgery Planning
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_52
BibTeX: Download
Weichselbaumer N., Herz R., van der Loop J., Mossmann S., Potten E., Kordon F., Christlein V.:
Werck der Bücher – digitale Methoden für die Typenanalyse
Inkunabelforschung für morgen – Wege, Ziele, Perspektiven. Tagung des Wolfenbütteler Arbeitskreises für Bibliotheks-, Buch- und Mediengeschichte (Wolfenbüttel, September 27, 2023 - September 29, 2023)
In: Bettina Wagner, Cornel Dora (ed.): Medium Buch, Wiesbaden: 2023
DOI: 10.13173/WIF.5
URL: https://www.harrassowitz-verlag.de/isbn_9783447184151.ahtml
BibTeX: Download
Nguyen TT., Folle L., Bayer T., Maier A.:
Detection of Arterial Occlusion on Magnetic Resonance Angiography of the Thigh using Deep Learning
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_60
BibTeX: Download
Vorberg L., Thamm F., Ditt H., Horger M., Hagen F., Maier A.:
Detection of Pulmonary Embolisms in NCCT Data Using nnDetection
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_28
BibTeX: Download

2022

Journal Articles

Wagner F., Thies M., Denzinger F., Gu M., Patwari M., Ploner S., Maul N., Pfaff L., Huang Y., Maier A.:
Trainable joint bilateral filters for enhanced prediction stability in low-dose CT
In: Scientific Reports 12 (2022), Article No.: 17540
ISSN: 2045-2322
DOI: 10.1038/s41598-022-22530-4
BibTeX: Download
Thies M., Wagner F., Huang Y., Gu M., Kling L., Pechmann S., Aust O., Grüneboom A., Schett G., Christiansen SH., Maier A.:
Calibration by differentiation – Self-supervised calibration for X-ray microscopy using a differentiable cone-beam reconstruction operator
In: Journal of Microscopy (2022)
ISSN: 0022-2720
DOI: 10.1111/jmi.13125
BibTeX: Download
Wagner F., Thies M., Gu M., Huang Y., Pechmann S., Patwari M., Ploner S., Aust O., Uderhardt S., Schett G., Christiansen SH., Maier A.:
Ultra low‐parameter denoising: Trainable bilateral filter layers in computed tomography
In: Medical Physics 49 (2022), p. 5107-5120
ISSN: 0094-2405
DOI: 10.1002/mp.15718
BibTeX: Download
Martín Vicario C., Kordon F., Denzinger F., El Barbari JS., Privalov M., Franke J., Thomas S., Kausch L., Maier A., Kunze H.:
Automatic plane adjustment of orthopedic intraoperative flat panel detector CT-volumes
In: Journal of Medical Imaging 9 (2022), p. 1-19
ISSN: 2329-4310
DOI: 10.1117/1.JMI.9.3.034001
BibTeX: Download
Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Multi-Stage Platform for (Semi-)Automatic Planning in Reconstructive Orthopedic Surgery
In: Journal of Imaging 8 (2022), Article No.: 108
ISSN: 2313-433X
DOI: 10.3390/jimaging8040108
BibTeX: Download
Gottschalk T., Maier A., Kordon F., Kreher BW.:
DL-based inpainting for metal artifact reduction for cone beam CT using metal path length information
In: Medical Physics (2022)
ISSN: 0094-2405
DOI: 10.1002/mp.15909
BibTeX: Download

Conference Contributions

Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Deep Geometric Supervision Improves Spatial Generalization in Orthopedic Surgery Planning
Medical Image Computing and Computer Assisted Intervention – MICCAI 2022 (Singapore, September 18, 2022 - September 22, 2022)
In: Wang L, Dou Q, Fletcher PT, Speidel S, Li S (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2022, Cham: 2022
DOI: 10.1007/978-3-031-16449-1_59
BibTeX: Download
Ploner S., Chen S., Won J., Husvogt L., Breininger K., Schottenhamml J., Fujimoto J., Maier A.:
A Spatiotemporal Model for Precise and Efficient Fully-Automatic 3D Motion Correction in OCT
25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022 (Singapore, SGP, September 18, 2022 - September 22, 2022)
In: Linwei Wang, Qi Dou, P. Thomas Fletcher, Stefanie Speidel, Shuo Li (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-16434-7_50
BibTeX: Download
Lam K., Husvogt L., Yaghy A., Camacho A., Maier A., Waheed NK.:
Automatic identification of Microaneurysms in Diabetic Retinopathy patients utilizing an nn-UNet
In: INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, ROCKVILLE: 2022
BibTeX: Download
Ploner S., Chen S., Moult E., Husvogt L., Schottenhamml J., Waheed NK., Fujimoto JG., Maier A.:
Ultrahigh resolution OCT, volume merging, and advanced signal reconstruction improve visualization of the RPE-Bruch's complex
In: Investigative Ophthalmology & Visual Science, Rockville: 2022
URL: https://iovs.arvojournals.org/article.aspx?articleid=2782224
BibTeX: Download
Schottenhamml J., Würfl T., Ploner S., Husvogt L., Hohberger B., Fujimoto JG., Maier A.:
Unsupervised OCT Denoising using speckle split
ARVO annual meeting 2022 (Denver)
In: INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, ROCKVILLE: 2022
DOI: 10.1038/s41598-023-37324-5
BibTeX: Download
Fu WL., Husvogt L., Breininger K., Schaffert R., Abu-Qamar O., Fujimoto JG., Maier A.:
Form Follows Function: Smart Network Design Enables Zero-shot Network Reuse
German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
DOI: 10.1007/978-3-658-36932-3_26
BibTeX: Download
Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Abstract: Automatic Path Planning for Safe Guide Pin Insertion in PCL Reconstruction Surgery
Bildverarbeitung für die Medizin 2022 (Heidelberg, June 26, 2022 - June 28, 2022)
In: Maier-Hein K, Deserno TM, Handels H, Maier A, Palm C, Tolxdorff T (ed.): Bildverarbeitung für die Medizin, Wiesbaden: 2022
DOI: 10.1007/978-3-658-36932-3_17
BibTeX: Download
Ravi A., Kordon F., Maier A.:
Automatic Switching of Organ Programs in Interventional X-ray Machines Using Deep Learning
Bildverarbeitung für die Medizin 2022 (Heidelberg, June 26, 2022 - June 28, 2022)
In: Maier-Hein K, Deserno TM, Handels H, Maier A, Palm C, Tolxdorff T (ed.): Bildverarbeitung für die Medizin 2022, Wiesbaden: 2022
DOI: 10.1007/978-3-658-36932-3_20
BibTeX: Download
Arbogast N., Kordon F., Kunze H., Swartman B., El Barbari JS., Breininger K.:
Towards Weakly Supervised Segmentation of Orthopaedic X-ray Images Using Constrained-CNN Losses
Bildverarbeitung für die Medizin 2022 (Heidelberg, June 26, 2022 - June 28, 2022)
In: Maier-Hein K, Deserno TM, Handels H, Maier A, Palm C, Tolxdorff T (ed.): Bildverarbeitung für die Medizin 2022, Wiesbaden: 2022
DOI: 10.1007/978-3-658-36932-3_30
BibTeX: Download
Sukesh R., Fieselmann A., Jaganathan S., Shetty K., Kaergel R., Kordon F., Kappler S., Maier A.:
Training Deep Learning Models for 2D Spine X-rays Using Synthetic Images and Annotations Created from 3D CT Volumes
Bildverarbeitung für die Medizin 2022 (Heidelberg, June 26, 2022 - June 28, 2022)
In: Maier-Hein K, Deserno TM, Handels H, Maier A, Palm C, Tolxdorff T (ed.): Bildverarbeitung für die Medizin 2022, Wiesbaden: 2022
DOI: 10.1007/978-3-658-36932-3_13
BibTeX: Download
Kunze H., Kordon F., Maier A., Breininger K.:
Direct and indirect image rotation estimation methods of orthopedic x-ray images
SPIE Medical Imaging 2022 (San Diego, CA, February 20, 2022 - March 28, 2022)
In: Išgum I, Colliot O (ed.): Medical Imaging 2022: Image Processing 2022
DOI: 10.1117/12.2606045
BibTeX: Download
Martín Vicario C., Kordon F., Denzinger F., El Barbari JS., Privalov M., Franke J., Maier A., Kunze H.:
Normalization techniques for CNN based analysis of surgical cone beam CT volumes
SPIE Medical Imaging 2022 (San Diego, California, February 20, 2022 - March 28, 2022)
In: Išgum I, Colliot O (ed.): Medial Imaging 2022, Image Processing 2022
DOI: 10.1117/12.2606973
BibTeX: Download
Gu M., Vesal S., Kosti RV., Maier A.:
Few-shot Unsupervised Domain Adaptation for Multi-modal Cardiac Image Segmentation
German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
DOI: 10.1007/978-3-658-36932-3_5
BibTeX: Download
Thies M., Wagner F., Gu M., Folle L., Felsner L., Maier A.:
Learned Cone-Beam CT Reconstruction Using Neural Ordinary Differential Equations
7th International Conference on Image Formation in X-Ray Computed Tomography (Baltimore, June 12, 2022 - June 16, 2022)
In: Proceedings Volume 12304, 7th International Conference on Image Formation in X-Ray Computed Tomography; 1230409 (2022) 2022
DOI: 10.1117/12.2646442
BibTeX: Download
Wagner F., Thies M., Karolczak M., Pechmann S., Huang Y., Gu M., Kling L., Weidner D., Aust O., Schett G., Christiansen S., Maier A.:
Monte Carlo Dose Simulation for In-Vivo X-Ray Nanoscopy
German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
DOI: 10.1007/978-3-658-36932-3_22
BibTeX: Download
Bhandary Panambur A., Madhu P., Maier A.:
Effect of Random Histogram Equalization on Breast Calcification Analysis Using Deep Learning
German Workshop on Medical Image Computing, 2022
DOI: 10.1007/978-3-658-36932-3_38
BibTeX: Download

2021

Journal Articles

Gottschalk T., Maier A., Kordon F., Kreher BW.:
View-Consistent Metal Segmentation in the Projection Domain for Metal Artifact Reduction in CBCT – An Investigation of Potential Improvement
In: Journal Machine Learning for Biomedical Imaging December 2021 issue (2021)
ISSN: 2766-905X
Open Access: https://www.melba-journal.org/pdf/2021:018.pdf
BibTeX: Download
Schottenhamml J., Wuerfl T., Mardin S., Ploner S., Husvogt L., Hohberger B., Lämmer R., Mardin C., Maier A.:
Glaucoma classification in 3 x 3 mm en face macular scans using deep learning in a different plexus
In: Biomedical Optics Express 12 (2021), p. 7434-7444
ISSN: 2156-7085
DOI: 10.1364/BOE.439991
URL: https://opg.optica.org/boe/fulltext.cfm?uri=boe-12-12-7434&id=464725
BibTeX: Download
Davari A., Islam S., Seehaus T., Hartmann A., Braun M., Maier A., Christlein V.:
On Mathews Correlation Coefficient and Improved Distance Map Loss for Automatic Glacier Calving Front Segmentation in SAR Imagery
In: IEEE Transactions on Geoscience and Remote Sensing (2021), p. 1-12
ISSN: 0196-2892
DOI: 10.1109/TGRS.2021.3115883
URL: https://arxiv.org/abs/2102.08312
BibTeX: Download
Szkitsak J., Werner R., Fernolendt S., Schwarz A., Ott O., Fietkau R., Hofmann C., Bert C.:
First clinical evaluation of breathing controlled four-dimensional computed tomography imaging
In: Physics and Imaging in Radiation Oncology 20 (2021), p. 56-61
ISSN: 2405-6316
DOI: 10.1016/j.phro.2021.09.005
BibTeX: Download
Werner R., Szkitsak J., Sentker T., Madesta F., Schwarz A., Fernolendt S., Vornehm M., Gauer T., Bert C., Hofmann C.:
Comparison of intelligent 4D CT sequence scanning and conventional spiral 4D CT: A first comprehensive phantom study
In: Physics in Medicine and Biology 66 (2021), Article No.: 015004
ISSN: 0031-9155
DOI: 10.1088/1361-6560/abc93a
BibTeX: Download
Vesal S., Gu M., Kosti RV., Maier A., Ravikumar N.:
Adapt Everywhere: Unsupervised Adaptation of Point-Clouds and Entropy Minimisation for Multi-modal Cardiac Image Segmentation
In: IEEE Transactions on Medical Imaging (2021)
ISSN: 0278-0062
DOI: 10.1109/TMI.2021.3066683
BibTeX: Download
Ploner S., Kraus M., Moult EM., Husvogt L., Schottenhamml J., Yasin Alibhai A., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
Efficient and high accuracy 3-D OCT angiography motion correction in pathology
In: Biomedical Optics Express 12 (2021), p. 125-146
ISSN: 2156-7085
DOI: 10.1364/BOE.411117
URL: https://www.osapublishing.org/boe/fulltext.cfm?uri=boe-12-1-125
BibTeX: Download
Husvogt L., Ploner S., Chen S., Stromer D., Schottenhamml J., Alibhai AY., Moult E., Waheed NK., Fujimoto JG., Maier A.:
Maximum a posteriori signal recovery for optical coherence tomography angiography image generation and denoising
In: Biomedical Optics Express 12 (2021), p. 55-68
ISSN: 2156-7085
DOI: 10.1364/BOE.408903
URL: https://www.osapublishing.org/boe/fulltext.cfm?uri=boe-12-1-55&id=444277
BibTeX: Download
Schottenhamml J., Moult EM., Ploner S., Chen S., Novais E., Husvogt L., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
OCT-OCTA segmentation: Combining structural and blood flow information to segment bruch's membrane
In: Biomedical Optics Express 12 (2021), p. 84-99
ISSN: 2156-7085
DOI: 10.1364/BOE.398222
BibTeX: Download

Conference Contributions

Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Automatic Path Planning for Safe Guide Pin Insertion in PCL Reconstruction Surgery
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) (Straßburg, September 27, 2021 - October 1, 2021)
In: de Bruijne M, et al. (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2021, Cham: 2021
DOI: 10.1007/978-3-030-87202-1_54
URL: https://link.springer.com/chapter/10.1007/978-3-030-87202-1_54
BibTeX: Download
Husvogt L., Abu-Qamar O., Levine E., Schottenhamml J., Ploner S., Breininger K., Moult E., Waheed NK., Fujimoto JG., Maier A.:
Applying nnU-Net to the segmentation of microaneurysms in OCTA data in patients with non-proliferative diabetic retinopathy
ARVO Annual Meeting 2021
URL: https://iovs.arvojournals.org/article.aspx?articleid=2773716
BibTeX: Download
Schottenhamml J., Ploner S., Husvogt L., Mardin S., Hohberger B., Mardin C., Maier A.:
Deep Learning Glaucoma Classification in enface OCTA scans of the human macular region
ARVO Annual Meeting 2021
Open Access: https://iovs.arvojournals.org/article.aspx?articleid=2773575
URL: https://iovs.arvojournals.org/article.aspx?articleid=2773575
BibTeX: Download
Ploner S., Schottenhamml J., Moult E., Husvogt L., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
Improved OCT motion correction in pathology using advanced eye motion modeling
In: INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, ROCKVILLE: 2021
BibTeX: Download
Kordon F., Maier A., Kunze H.:
Latent Shape Constraint for Anatomical Landmark Detection on Spine Radiographs
Bildverarbeitung für die Medizin 2021 (Virtual Conference, March 7, 2021 - March 9, 2021)
In: Palm C, Deserno TM, Handels H, Maier A, Maier-Hein K, Tolxdorff T (ed.): Bildverarbeitung für die Medizin 2021, Wiesbaden: 2021
DOI: 10.1007/978-3-658-33198-6_85
BibTeX: Download
Gottschalk T., Maier A., Kordon F., Kreher BW.:
Learning-based Patch-wise Metal Segmentation with Consistency Check
Bildverarbeitung für die Medizin 2021 (Virtual Conference, March 7, 2021 - March 9, 2021)
In: Palm C, Deserno TM, Handels H, Maier A, Maier-Hein K, Tolxdorff T (ed.): Bildverarbeitung für die Medizin 2021, Wiesbaden: 2021
DOI: 10.1007/978-3-658-33198-6_4
BibTeX: Download
Husvogt L., Ploner S., Chen S., Stromer D., Schottenhamml J., Alibhai Y., Moult E., Waheed NK., Fujimoto JG., Maier A.:
Abstract: Maximum A-posteriori Signal Recovery for OCT Angiography Image Generation
German Workshop on Medical Image Computing, 2021 (Regensburg, March 7, 2021 - March 9, 2021)
In: Christoph Palm, Heinz Handels, Klaus Maier-Hein, Thomas M. Deserno, Andreas Maier, Thomas Tolxdorff (ed.): Informatik aktuell 2021
DOI: 10.1007/978-3-658-33198-6_61
BibTeX: Download
Martín Vicario C., Kordon F., Denzinger F., Weiten M., Thomas S., Kausch L., Franke J., Keil H., Maier A., Kunze H.:
Automatic Plane Adjustment in Surgical Cone Beam CT-volumes
German Workshop on Medical Image Computing, 2021 (Regensburg, March 7, 2021 - March 9, 2021)
In: Christoph Palm, Heinz Handels, Klaus Maier-Hein, Thomas M. Deserno, Andreas Maier, Thomas Tolxdorff (ed.): Informatik aktuell 2021
DOI: 10.1007/978-3-658-33198-6_40
BibTeX: Download
Diehm J., Hermann R., Pertlwieser T., Cheng W., Fu WL., Kordon F., Maier A.:
ScanRacer – Fast Track Annotation of Segmentation Masks in Volumetric Medical Images
HEALTHINF - 14th International Conference on Health Informatics (Online Streaming, February 11, 2021 - February 13, 2021)
BibTeX: Download
Sukesh R., Goshika SK., Narayanan SS., Bhombore VV., Fu WL., Kordon F., Maier A.:
Velo-CT – A Collaborative 3D Racing Game as Incentive for Medical Image Annotation
HEALTHINF - 14th International Conference on Health Informatics (Online Streaming, February 11, 2021 - February 13, 2021)
BibTeX: Download

Miscellaneous

Thamm F., Denzinger F., Rist L., Martín Vicario C., Kordon F., Maier A.:
Segmentation of the Carotid Lumen and Vessel Wall using Deep Learning and Location Priors
(2021)
BibTeX: Download
(Conference report)

2020

Journal Articles

Werner R., Sentker T., Madesta F., Schwarz A., Vornehm M., Gauer T., Hofmann C.:
Intelligent 4D CT sequence scanning (i4DCT): First scanner prototype implementation and phantom measurements of automated breathing signal-guided 4D CT
In: Medical Physics 47 (2020), p. 2408-2412
ISSN: 0094-2405
DOI: 10.1002/mp.14106
BibTeX: Download
Vesal S., Gu M., Maier A., Ravikumar N.:
Spatio-temporal Multi-task Learning for Cardiac MRI Left Ventricle Quantification
In: IEEE Journal of Biomedical and Health Informatics (2020)
ISSN: 2168-2194
DOI: 10.1109/JBHI.2020.3046449
URL: https://ieeexplore.ieee.org/document/9302580
BibTeX: Download

Conference Contributions

Martín Vicario C., Kordon F., Denzinger F., Weiten M., Thomas S., Kausch L., Franke J., Keil H., Maier A., Kunze H.:
Automatic Plane Adjustment of Orthopedic Intraoperative Flat Panel Detector CT-Volumes
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) (Lima, October 4, 2020 - October 8, 2020)
In: Martel AL, Abolmaesumi P, Stoyanov D, Mateus D, Zuluaga MA, Zhou SK, Racoceanu D, Joskowicz L (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2020, Cham: 2020
DOI: 10.1007/978-3-030-59713-9_47
BibTeX: Download
Kordon F., Maier A., Swartman B., Privalov M., El Barbari JS., Kunze H.:
Contour-Based Bone Axis Detection for X-Ray Guided Surgery on the Knee
International Conference on Medical Image Computing and Computer-Assisted Intervention (Lima, October 4, 2020 - October 8, 2020)
In: Martel AL, et al. (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2020, Cham: 2020
DOI: 10.1007/978-3-030-59725-2_65
BibTeX: Download
Kordon F., Maier A., Swartman B., Kunze H.:
Font Augmentation: Implant and Surgical Tool Simulation for X-Ray Image Processing
Bildverarbeitung für die Medizin 2020 (Berlin, March 15, 2020 - March 17, 2020)
In: Tolxdorff T., Deserno T., Handels H., Maier A., Maier-Hein K., Palm C. (ed.): Bildverarbeitung für die Medizin 2020, Wiesbaden: 2020
DOI: 10.1007/978-3-658-29267-6_36
BibTeX: Download
Kordon F., Fischer P., Privalov M., Swartman B., Schnetzke M., Franke J., Lasowski R., Maier A., Kunze H.:
Multi-Task Framework for X-Ray Guided Planning in Knee Surgery
Bildverarbeitung für die Medizin 2020 (Berlin, March 15, 2020 - March 17, 2020)
In: Tolxdorff T., Deserno T., Handels H., Maier A., Maier-Hein K., Palm C. (ed.): Bildverarbeitung für die Medizin 2020, Wiesbaden: 2020
DOI: 10.1007/978-3-658-29267-6_57
BibTeX: Download
Husvogt L., Ploner S., Stromer D., Schottenhamml J., Moult E., Fujimoto JG., Maier A.:
Compressed sensing for optical coherence tomography angiography volume generation
International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
DOI: 10.1007/978-3-658-29267-6_19
BibTeX: Download
Hoßbach J., Husvogt L., Kraus M., Fujimoto JG., Maier A.:
Deep OCT angiography image generation for motion artifact suppression
International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
DOI: 10.1007/978-3-658-29267-6_55
BibTeX: Download
Fu WL., Husvogt L., Ploner S., Fujimoto JG., Maier A.:
Modularization of deep networks allows cross-modality reuse: lesson learnt
International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
DOI: 10.1007/978-3-658-29267-6_61
BibTeX: Download
Fan F., Qiu J., Wang J., Valianos S., Farooq MM., Fu WL., Kordon F., Maier A.:
Odin’s Eye – A Close Look at Gamification of Labelling of Ophthalmic Diseases
Joint Conference of the GMDS & CEN-IBS 2020 (Online Streaming, September 6, 2020 - September 9, 2020)
BibTeX: Download

2019

Journal Articles

Moult EM., Alibhai AY., Rebhun CB., Lee B., Ploner S., Schottenhamml J., Husvogt L., Baumal CR., Witkin AJ., Maier A., Duker JS., Rosenfeld P., Waheed NK., Fujimoto JG.:
Spatial Distribution of Choriocapillaris Impairment in Eyes with Choroidal Neovascularization Secondary to Age-Related Macular Degeneration
In: Retina-The Journal of Retinal and Vitreous Diseases (2019)
ISSN: 0275-004X
DOI: 10.1097/IAE.0000000000002556
URL: https://journals.lww.com/retinajournal/Abstract/publishahead/SPATIAL_DISTRIBUTION_OF_CHORIOCAPILLARIS.96058.aspx
BibTeX: Download

Conference Contributions

Kordon F., Fischer P., Privalov M., Swartman B., Schnetzke M., Franke J., Lasowski R., Maier A., Kunze H.:
Multi-task Localization and Segmentation for X-Ray Guided Planning in Knee Surgery
22nd International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 (Shenzhen, October 13, 2019 - October 17, 2019)
In: Shen D., Liu T., Peters T.M., Staib L.H., Essert C., Zhou S., Yap P.-T., Khan A. (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2019, Cham: 2019
DOI: 10.1007/978-3-030-32226-7_69
BibTeX: Download
Ploner S., Schottenhamml J., Moult EM., Husvogt L., Alibhai AY., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
Correction of artifacts from misregistered B-scans in orthogonally scanned and registered OCT angiography
ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
In: Investigative Ophthalmology & Visual Science 2019
URL: https://iovs.arvojournals.org/article.aspx?articleid=2745781&resultClick=1
BibTeX: Download
Lee B., Chen S., Moult EM., Alibhai AY., Carrasco-Zevallos O., Husvogt L., Mehta N., Waheed NK., Duker JS., Fujimoto JG.:
Ultrahigh-Resolution SD-OCT of the Human Retina with Extended Imaging Range Using Reference Arm Length Modulation
ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
In: Investigative Ophthalmology & Visual Science 2019
URL: https://iovs.arvojournals.org/article.aspx?articleid=2746181&resultClick=1
BibTeX: Download
Husvogt L., Ploner S., Moult EM., Alibhai AY., Schottenhamml J., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
Using Medical Image Reconstruction Methods for Denoising of OCTA Data
ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
In: Investigative Ophthalmology & Visual Science 2019
URL: https://iovs.arvojournals.org/article.aspx?articleid=2746928&resultClick=1
BibTeX: Download
Kordon F., Lasowski R., Swartman B., Franke J., Fischer P., Kunze H.:
Improved X-Ray Bone Segmentation by Normalization and Augmentation Strategies
Bildverarbeitung für die Medizin 2019 (Lübeck, March 17, 2019 - March 19, 2019)
In: Handels H., Deserno T.M., Maier A., Maier-Hein K.H., Palm C., Tolxdorff T. (ed.): Bildverarbeitung für die Medizin 2019, Wiesbaden: 2019
DOI: 10.1007/978-3-658-25326-4_24
BibTeX: Download

2018

Journal Articles

Schirrmacher F., Köhler T., Endres J., Lindenberger T., Husvogt L., Fujimoto JG., Hornegger J., Dörfler A., Maier A., Hölter P.:
Temporal and Volumetric Denoising via Quantile Sparse Image Prior
In: Medical Image Analysis 48 (2018), p. 131-146
ISSN: 1361-8415
DOI: 10.1016/j.media.2018.06.002
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2018/Schirrmacher18-TAV.pdf
BibTeX: Download
Rebhun CB., Moult EM., Ploner S., Moreira-Neto C., Alibhai AY., Schottenhamml J., Lee B., Choi W., Rifai FA., Tams M., Husvogt L., Baumal CR., Witkin AJ., Maier A., Rosenfeld P., Duker JS., Fujimoto JG., Waheed NK.:
Analyzing relative blood flow speeds in choroidal neovascularization using variable interscan time analysis OCT angiography
In: Ophthalmology Retina 2 (2018), p. 306-319
ISSN: 2468-7219
DOI: 10.1016/j.oret.2017.08.013
URL: https://www.sciencedirect.com/science/article/abs/pii/S2468653017303561?via=ihub
BibTeX: Download

Book Contributions

Husvogt L., Ploner S., Maier A.:
Optical Coherence Tomography
In: Andreas MaierStefan SteidlVincent ChristleinJoachim Hornegger (ed.): Medical Imaging Systems, Cham: Springer, 2018, p. 251-261 (Lecture Notes in Computer Science book series (LNCS), Vol.11111)
ISBN: 978-3-319-96520-8
DOI: 10.1007/978-3-319-96520-8_12
URL: https://link.springer.com/chapter/10.1007/978-3-319-96520-8_12
BibTeX: Download

Conference Contributions

Husvogt L., Arya M., Alibhai AY., Moult EM., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
Automatic detection of capillary dilation and looping in patients with diabetic retinopathy from optical coherence tomography angiography data
ARVO Annual Meeting 2018 (Honolulu, HI, USA, April 28, 2018 - May 3, 2018)
URL: https://iovs.arvojournals.org/article.aspx?articleid=2694335
BibTeX: Download
Husvogt L., Moult EM., Waheed NK., Fujimoto JG., Maier A.:
Efficient Labeling of Optical Coherence Tomography Angiography Data using Eye Tracking
Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
In: Maier, Andreas Deserno, Thomas Martin Handels, Heinz Maier-Hein, Klaus Palm, Christoph Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin, Heidelberg: 2018
DOI: 10.1007/978-3-662-56537-7_17
URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_17
BibTeX: Download
Husvogt L., Alibhai AY., Moult EM., Fujimoto JG., Waheed NK., Maier A.:
First Approaches Towards Automatic Detection of Microaneurysms in OCTA Images
Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
In: Maier, Andreas Deserno, Thomas Martin Handels, Heinz Maier-Hein, Klaus Palm, Christoph Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin, Heidelberg: 2018
DOI: 10.1007/978-3-662-56537-7_11
URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_11
BibTeX: Download
Schottenhamml J., Moult EM., Novais EA., Kraus M., Lee B., Choi W., Ploner S., Husvogt L., Lu CD., Yiu P., Rosenfeld P., Duker JS., Maier A., Waheed NK., Fujimoto JG.:
OCT-OCTA Segmentation
Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
In: Maier, Andreas Deserno, Thomas Martin Handels, Heinz Maier-Hein, Klaus C., Palm Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin: 2018
DOI: 10.1007/978-3-662-56537-7_76
URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_76
BibTeX: Download
Ploner S., Kraus MF., Husvogt L., Moult EM., Alibhai AY., Schottenhamml J., Geimer T., Rebhun CB., Lee B., Baumal CR., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
3-D OCT Motion Correction Efficiently Enhanced with OCT Angiography
ARVO annual meeting 2018
In: Investigative Ophthalmology & Visual Science 2018
Open Access: https://iovs.arvojournals.org/article.aspx?articleid=2694583
URL: https://iovs.arvojournals.org/article.aspx?articleid=2694583
BibTeX: Download
Schirrmacher F., Köhler T., Husvogt L., Fujimoto JG., Hornegger J., Maier A.:
Abstract: QuaSI - Quantile Sparse Image A Prior for Spatio-Temporal Denoising of Retinal OCT Data
Bildverarbeitung für die Medizin 2018 (Erlangen)
In: Informatik aktuell 2018
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2018/Schirrmacher18-AQQ.pdf
BibTeX: Download

2017

Journal Articles

Cole ED., Moult EM., Dang S., Choi W., Ploner S., Lee B., Louzada RN., Novais EA., Schottenhamml J., Husvogt L., Maier A., Fujimoto JG., Waheed NK., Duker JS.:
The Definition, Rationale, and Effects of Thresholding in OCT Angiography
In: Ophthalmology Retina 1/2017 (2017), p. 435-447
ISSN: 2468-7219
DOI: 10.1016/j.oret.2017.01.019
URL: https://www.sciencedirect.com/science/article/abs/pii/S2468653017300283
BibTeX: Download
Skalet A., Li Y., Lu CD., Jia Y., Lee B., Husvogt L., Maier A., Fujimoto JG., Thomas CR., Huang D.:
Optical Coherence Tomography Angiography Characteristics of Iris Melanocytic Tumors
In: Ophthalmology 124 (2017), p. 197-204
ISSN: 0161-6420
DOI: 10.1016/j.ophtha.2016.10.003
URL: https://www.sciencedirect.com/science/article/pii/S0161642016313288#!
BibTeX: Download

Conference Contributions

Alibhai AY., Moult EM., Rebhun CB., Moreira-Neto C., Novais EA., Lee B., Schottenhamml J., Husvogt L., Maier A., Rosenfeld P., Duker JS., Waheed NK., Fujimoto JG.:
Flow Void Analysis: Multiscale Quantitation and Visualization of Choriocapillaris Alterations in Age-Related Macular Degeneration Using OCT Angiography
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science 2017
Open Access: https://iovs.arvojournals.org/article.aspx?articleid=2637739&resultClick=1
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Alibhai17-FVA.pdf
BibTeX: Download
Ploner S., Moult EM., Schottenhamml J., Husvogt L., Lu CD., Rebhun CB., Alibhai AY., Duker JS., Waheed NK., Maier A., Fujimoto JG.:
Hybrid OCT-OCTA Vessel Visualization for Projection-Free Display of the Intermediate and Deep Retinal Plexuses
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science 2017
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Ploner17-HOV.pdf
BibTeX: Download
Schottenhamml J., Moult EM., Novais EA., Kraus M., Lee B., Choi W., Ploner S., Husvogt L., Lu CD., Yiu P., Rosenfeld P., Duker JS., Maier A., Waheed NK., Fujimoto JG.:
OCT-OCTA Segmentation: a Novel Framework and an Application to Segment Bruch's Membrane in the Presence of Drusen
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science 2017
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Schottenhamml17-OSA.pdf
BibTeX: Download
Lee B., Moult EM., Ploner S., Alibhai AY., Rebhun CB., Moreira-Neto C., Husvogt L., Maier A., Wollstein G., Schuman J., Waheed NK., Duker JS., Fujimoto JG.:
Parallel Variable Interscan Time Analysis (VISTA) OCTA and en Face Doppler OCT of Optic Disc and Peripapillary Vasculature
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science 2017
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Lee17-PVI.pdf
BibTeX: Download
Yiu P., Moult EM., Ploner S., Lee B., Husvogt L., Maier A., Spaide RF., Duker JS., Waheed NK., Fujimoto JG.:
Smoothed and Resolved Thresholding (SmaRT-) Display: A New OCTA Display Technique to Resolve the Low Flow Ambiguity
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science 2017
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Yiu17-SAR.pdf
BibTeX: Download
Moult EM., Ploner S., Choi W., Lee B., Husvogt L., Lu CD., Novais EA., Cole ED., Potsaid BM., Duker JS., Hornegger J., Maier A., Waheed NK., Fujimoto JG.:
Visualizing microvascular flow variation in OCTA using variable interscan time analysis (VISTA)
SPIE BiOS (San Francisco, CA, USA, January 28, 2017 - February 2, 2017)
In: Proc. SPIE 10053, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXI 2017
DOI: 10.1117/12.2254845
URL: https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10053/1/Visualizing-microvascular-flow-variation-in-OCTA-using-variable-interscan-time/10.1117/12.2254845.full?SSO=1
BibTeX: Download
Schirrmacher F., Köhler T., Husvogt L., Fujimoto JG., Hornegger J., Maier A.:
QuaSI: Quantile Sparse Image Prior for Spatio-Temporal Denoising of Retinal OCT Data
Medical Image Computing and Computer-Assisted Intervention (Quebec City, QC, Canada, September 11, 2017 - September 13, 2017)
In: Medical Image Computing and Computer-Assisted Intervention - MICCAI 2017, Proceedings, Part II 2017
DOI: 10.1007/978-3-319-66185-8_10
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Schirrmacher17-QQS.pdf
BibTeX: Download
Moult EM., Ploner S., Rebhun CB., Alibhai AY., Lee B., Moreira-Neto C., Novais EA., Schottenhamml J., Husvogt L., Maier A., Rosenfeld P., Duker JS., Waheed NK., Fujimoto JG.:
Variable Interscan Time Analysis (VISTA-) Optical Coherence Tomography Angiography (OCTA) of Blood Flow Speeds in Eyes with Diabetic Retinopathy
ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
In: Investigative Ophthalmology & Visual Science, ARVO: 2017
URL: https://iovs.arvojournals.org/article.aspx?articleid=2637998&resultClick=1
BibTeX: Download

2016

Journal Articles

Schottenhamml J., Moult EM., Ploner S., Lee B., Novais EA., Cole ED., Dang S., Lu CD., Husvogt L., Waheed NK., Duker JS., Hornegger J., Fujimoto JG.:
An Automatic, Intercapillary Area-based Algorithm for Quantifying Diabetes-related Capillary Dropout Using Optical Coherence Tomography Angiography
In: Retina (Philadelphia, Pa.) 36 (2016), p. S93-S101
ISSN: 1539-2864
DOI: 10.1097/IAE.0000000000001288
URL: https://www.ncbi.nlm.nih.gov/pubmed/28005667
BibTeX: Download
Ploner S., Moult EM., Choi W., Waheed NK., Lee B., Novais EA., Cole ED., Potsaid B., Husvogt L., Schottenhamml J., Maier A., Rosenfeld P., Duker JS., Hornegger J., Fujimoto JG.:
Toward Quantitative Optical Coherence Tomography Angiography: Visualizing Blood Flow Speeds in Ocular Pathology Using Variable Interscan Time Analysis
In: Retina (Philadelphia, Pa.) 32 (2016), p. S118-S126
ISSN: 1539-2864
DOI: 10.1097/IAE.0000000000001328
BibTeX: Download
Giacomelli M., Husvogt L., Vardeh H., Faulkner-Jones BE., Hornegger J., Connolly JL., Fujimoto JG.:
Virtual Hematoxylin and Eosin Transillumination Microscopy Using Epi-Fluorescence Imaging
In: PLoS ONE 11 (2016), p. 1-13
ISSN: 1932-6203
DOI: 10.1371/journal.pone.0159337
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Giacomelli16-VHA.pdf
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Lane M., Moult EM., Novais EA., Louzada RN., Cole ED., Lee B., Husvogt L., Keane PA., Denniston AK., Witkin AJ., Baumal CR., Fujimoto JG., Duker JS., Waheed NK.:
Visualizing the Choriocapillaris Under Drusen: Comparing 1050-nm Swept-Source Versus 840-nm Spectral-Domain Optical Coherence Tomography Angiography
In: Investigative Ophthalmology & Visual Science 57 (2016), p. OCT585-OCT590
ISSN: 0146-0404
DOI: 10.1167/iovs.15-18915
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Lane16-VTC.pdf
BibTeX: Download

Conference Contributions

Schottenhamml J., Moult EM., Ploner S., Lee B., Lu CD., Husvogt L., Waheed NK., Duker JS., Hornegger J., Fujimoto JG.:
An automatic algorithm measuring the retinal intercapillary area to assess diabetic retinopathy
ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
In: Investigative Ophthalmology & Visual Science 2016
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Schottenhamml16-AAA.pdf
BibTeX: Download
Husvogt L., Moult EM., Lee B., Waheed NK., Hornegger J., Spaide RF., Maier A., Fujimoto JG.:
SlicerOCT: A 3-D visualization platform for orthoplane viewing of OCT(A) datasets
ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
In: Investigative Ophthalmology & Visual Science, ARVO: 2016
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Husvogt16-SA3.pdf
BibTeX: Download
Ploner S., Moult EM., Waheed NK., Husvogt L., Schottenhamml J., Lee B., Hornegger J., Duker JS., Rosenfeld P., Fujimoto JG.:
Toward quantitative OCT angiography: visualizing flow impairment using variable interscan time analysis (VISTA)
ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
In: Investigative Ophthalmology & Visual Science 2016
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Ploner16-TQO.pdf
BibTeX: Download
Husvogt L., Maier A., Hornegger J.:
Advanced Image Processing for Optical Coherence Tomography Angiography
10th Joint Workshop of the German Research Training Groups in Computer Science (Schloss Dagstuhl - Leibniz-Zentrum für Informatik)
In: Benedikt Etzold, René Richter, Maximilian Eibl, Wolfgang Lehner (ed.): Proceedings of the 10th Joint Workshop of the German Research Training Groups in Computer Science, Chemnitz: 2016
BibTeX: Download
Giacomelli M., Yoshitake T., Husvogt L., Cahill L., Ahsen O., Vardeh H., Sheykin Y., Faulkner-Jones BE., Hornegger J., Brooker J., Cable AE., Connolly JL., Fujimoto JG.:
Design of a portable wide field of view GPU-accelerated multiphoton imaging system for real-time imaging of breast surgical specimens
SPIE Photonics West (San-Francisco, CA, February 14, 2016 - February 16, 2016)
In: Multiphoton Microscopy in the Biomedical Sciences XVI 2016
DOI: 10.1117/12.2209241
URL: https://www.spiedigitallibrary.org/conference-proceedings-of-spie/9712/1/Design-of-a-portable-wide-field-of-view-GPU-accelerated/10.1117/12.2209241.full?SSO=1
BibTeX: Download
Louzada RN., Novais EA., Adhi M., Cole ED., Moult EM., Husvogt L., Witkin AJ., Baumal CR., Fujimoto JG., Duker JS., Waheed NK.:
Choroidal Neovascularization Analyzed on Ultra-High Speed Swept Source Optical Coherence Tomography Angiography Compared to Spectral Domain Optical Coherence Tomography Angiography
ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
In: Investigative Ophthalmology & Visual Science, ARVO: 2016
URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Louzada16-CNA.pdf
BibTeX: Download

2015

Journal Articles

Nattenmüller J., Hosch W., Nguyen TT., Skornitzke S., Jöres A., Grenacher L., Kauczor HU., Sommer CM., Stiller W.:
Hypodense liver lesions in patients with hepatic steatosis: do we profit from dual-energy computed tomography?
In: European Radiology 25 (2015), p. 3567-3576
ISSN: 0938-7994
DOI: 10.1007/s00330-015-3772-6
BibTeX: Download

2008

Conference Contributions

Bhat S., Savvides M.:
Evaluating Active Shape Models for Eye-Shape Classification
2008 IEEE International Conference on Acoustics, Speech and Signal Processing (Las Vegas, March 31, 2008 - April 4, 2008)
In: 2008 IEEE International Conference on Acoustics, Speech and Signal Processing 2008
DOI: 10.1109/ICASSP.2008.4518838
URL: https://ieeexplore.ieee.org/document/4518838
BibTeX: Download

2023 – Best Masters thesis in ICT-Media systems (Siemens-Healthineers)

Sheethal Bhat

More about this award

Best Master's thesis in Information Communication Theory Department (Media systems)
2023 – 3rd Place - Best Paper Award (2023 IEEE International Conference on Biomedical and Health Informatics (BHI))

Linda Vorberg, Siri Pflüger, Robert Richer, Katharina Jäger, Arne Küderle, Nicolas Rohleder, Björn Eskofier
2013 – Divisional Recognition Award (Intel Inc. USA)

Sheethal Bhat
2012 – Divisional Recognition Award (Intel Inc. USA)

Sheethal Bhat
2009 – Spontaneous Recognition Award (Intel Inc. USA)

Sheethal Bhat
2006 – Customer Thanks Award (IBM India)

Sheethal Bhat
2006 – IBM Bravo Award (IBM India)

Sheethal Bhat
2006 – Customer Satisfaction Award (IBM India)

Sheethal Bhat

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Breast Cancer Research

Learning Algorithms for Medical Big Data Analysis (LAMBDA)

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