Mingxuan Gu

2025

Journal Articles

• Possart D., Mill L., Vollnhals F., Hildebrand T., Suter P., Hoffmann M., Utz J., Augsburger D., Thies M., Gu M., Wagner F., Sarau G., Christiansen S., Breininger K.:
  Addressing data scarcity in nanomaterial segmentation networks with differentiable rendering and generative modeling
  In: npj Computational Materials 11 (2025), Article No.: 197
  ISSN: 2057-3960
  DOI: 10.1038/s41524-025-01702-6
  BibTeX: Download
• Mei S., Fan F., Thies M., Gu M., Wagner F., Aust O., Erceg I., Mirzaei Z., Neag G., Sun Y., Huang Y., Maier A.:
  BigReg: an efficient registration pipeline for high-resolution X-ray and light-sheet fluorescence microscopy
  In: Journal of Medical Imaging (2025)
  ISSN: 2329-4310
  DOI: 10.1117/1.JMI.12.5.054004
  BibTeX: Download
• Sun Y., Huang Y., Yang Z., Schneider LS., Thies M., Gu M., Mei S., Bayer S., Zöllner FG., Maier A.:
  EAGLE: an edge-aware gradient localization enhanced loss for CT image reconstruction
  In: Journal of Medical Imaging 12 (2025), Article No.: 014001
  ISSN: 2329-4310
  DOI: 10.1117/1.JMI.12.1.014001
  BibTeX: Download

Conference Contributions

• Sun Y., Schneider LS., Ye C., Gu M., Mei S., Bayer S., Maier A.:
  Learning Wavelet-Sparse FDK for 3D Cone-Beam CT Reconstruction
  International Conference on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (, May 27, 2025 - May 30, 2025)
  BibTeX: Download

2024

Journal Articles

• Thies M., Wagner F., Maul N., Yu H., Goldmann M., Schneider LS., Gu M., Mei S., Folle L., Preuhs A., Manhart M., Maier A.:
  A gradient-based approach to fast and accurate head motion compensation in cone-beam CT
  In: IEEE Transactions on Medical Imaging (2024), p. 1-1
  ISSN: 0278-0062
  DOI: 10.1109/TMI.2024.3474250
  BibTeX: Download

Conference Contributions

• Gu M., Thies M., Mei S., Wagner F., Fan M., Sun Y., Pan Z., Vesal S., Kosti RV., Possart D., Utz J., Maier A.:
  Unsupervised Domain Adaptation Using Soft-Labeled Contrastive Learning with Reversed Monte Carlo Method for Cardiac Image Segmentation
  27th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2024 (Marrakesh, October 6, 2024 - October 10, 2024)
  In: Marius George Linguraru, Qi Dou, Aasa Feragen, Stamatia Giannarou, Ben Glocker, Karim Lekadir, Julia A. Schnabel (ed.): Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. 27th International Conference, Marrakesh, Morocco, October 6–10, 2024, Proceedings, Part IX, Cham: 2024
  DOI: 10.1007/978-3-031-72114-4_65
  BibTeX: Download
• Thies M., Maul N., Mei S., Pfaff L., Vysotskaya N., Gu M., Utz J., Possart D., Folle L., Wagner F., Maier A.:
  Differentiable Score-Based Likelihoods: Learning CT Motion Compensation from Clean Images
  Medical Image Computing and Computer Assisted Intervention – MICCAI 2024
  In: Medical Image Computing and Computer Assisted Intervention – MICCAI 2024, Cham: 2024
  DOI: 10.1007/978-3-031-72104-5_25
  BibTeX: Download
• Mei S., Fan F., Wagner F., Thies M., Gu M., Sun Y., Maier A.:
  Segmentation-Guided Knee Radiograph Generation using Conditional Diffusion Models
  The 8th International Conference on Image Formation in X-Ray Computed Tomography (Bamberg, Germany, August 5, 2024 - August 9, 2024)
  DOI: 10.48550/arXiv.2404.03541
  URL: https://arxiv.org/pdf/2404.03541
  BibTeX: Download
• Sun Y., Schneider LS., Fan F., Thies M., Gu M., Mei S., Zhou Y., Bayer S., Maier A.:
  Data-Driven Filter Design in FBP: Transforming CT Reconstruction with Trainable Fourier Series
  (2024)
  DOI: 10.48550/arXiv.2401.16039
  BibTeX: Download
• Thies M., Wagner F., Gu M., Mei S., Huang Y., Pechmann S., Aust O., Weidner D., Neag G., Uderhardt S., Schett G., Christiansen S., Maier A.:
  Exploring Epipolar Consistency Conditions for Rigid Motion Compensation in In-vivo X-ray Microscopy
  German Conference on Medical Image Computing, BVM 2024 (Erlangen, March 10, 2024 - March 12, 2024)
  In: Andreas Maier, Thomas M. Deserno, Heinz Handels, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Bildverarbeitung für die Medizin 2024. BVM 2024, Wiesbaden: 2024
  DOI: 10.1007/978-3-658-44037-4_60
  URL: https://arxiv.org/abs/2303.00449
  BibTeX: Download
• Thies M., Wagner F., Maul N., Mei S., Gu M., Pfaff L., Vysotskaya N., Yu H., Maier A.:
  On the influence of smoothness constraints in computed tomography motion compensation
  8th International Conference on Image Formation in X-Ray Computed Tomography (CT Meeting) (Bamberg, August 5, 2024 - August 9, 2024)
  URL: https://www.ct-meeting.org/?p=program
  BibTeX: Download

2023

Journal Articles

• Thies M., Wagner F., Maul N., Folle L., Meier M., Rohleder M., Schneider LS., Pfaff L., Gu M., Utz J., Denzinger F., Manhart M., Maier A.:
  Gradient-based geometry learning for fan-beam CT reconstruction
  In: Physics in Medicine and Biology 68 (2023), Article No.: 205004
  ISSN: 0031-9155
  DOI: 10.1088/1361-6560/acf90e
  URL: https://iopscience.iop.org/article/10.1088/1361-6560/acf90e
  BibTeX: Download

Conference Contributions

• Raghunath A., Wagner F., Thies M., Gu M., Pechmann S., Aust O., Weidner D., Neag G., Schett G., Christiansen SH., Uderhardt S., Maier A.:
  Unsupervised Super Resolution in X-ray Microscopy using a Cycle-consistent Generative Model
  BVM Workshop Bildverarbeitung für die Medizin 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
  In: Bildverarbeitung für die Medizin 2023 2023
  DOI: 10.1007/978-3-658-41657-7_19
  BibTeX: Download
• Gu M., Thies M., Wagner F., Pechmann S., Aust O., Weidner D., Neag G., Pan Z., Utz J., Schett G., Christiansen S., Uderhardt S., Maier A.:
  Cavity Segmentation in X-ray Microscopy Scans of Mouse Tibiae
  Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
  In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
  DOI: 10.1007/978-3-658-41657-7_56
  BibTeX: Download
• Utz J., Weise T., Schlereth M., Wagner F., Thies M., Gu M., Uderhardt S., Breininger K.:
  Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN
  2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 (Paris, October 2, 2023 - October 6, 2023)
  In: Proceedings - 2023 IEEE/CVF International Conference on Computer Vision Workshops, ICCVW 2023 2023
  DOI: 10.1109/ICCVW60793.2023.00417
  BibTeX: Download
• Utz J., Schlereth M., Qiu J., Thies M., Wagner F., Brahim OB., Gu M., Uderhardt S., Breininger K.:
  McLabel: A Local Thresholding Tool for Efficient Semi-automatic Labelling of Cells in Fluorescence Microscopy
  Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, DEU, July 2, 2023 - July 4, 2023)
  In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
  DOI: 10.1007/978-3-658-41657-7_20
  BibTeX: Download
• Wagner F., Thies M., Pfaff L., Maul N., Pechmann S., Gu M., Utz J., Aust O., Weidner D., Neag G., Uderhardt S., Choi JH., Maier A.:
  Noise2Contrast: Multi-contrast Fusion Enables Self-supervised Tomographic Image Denoising
  28th International Conference on Information Processing in Medical Imaging, IPMI 2023 (San Carlos de Bariloche, ARG, June 18, 2023 - June 23, 2023)
  In: Alejandro Frangi, Marleen de Bruijne, Demian Wassermann, Nassir Navab (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
  DOI: 10.1007/978-3-031-34048-2_59
  BibTeX: Download
• Wagner F., Thies M., Pfaff L., Aust O., Pechmann S., Weidner D., Maul N., Rohleder M., Gu M., Utz J., Denzinger F., Maier A.:
  On the Benefit of Dual-Domain Denoising in a Self-Supervised Low-Dose CT Setting
  20th IEEE International Symposium on Biomedical Imaging, ISBI 2023 (Cartagena, April 18, 2023 - April 21, 2023)
  In: Proceedings - International Symposium on Biomedical Imaging 2023
  DOI: 10.1109/ISBI53787.2023.10230511
  BibTeX: Download

2022

Journal Articles

• Wagner F., Thies M., Denzinger F., Gu M., Patwari M., Ploner S., Maul N., Pfaff L., Huang Y., Maier A.:
  Trainable joint bilateral filters for enhanced prediction stability in low-dose CT
  In: Scientific Reports 12 (2022), Article No.: 17540
  ISSN: 2045-2322
  DOI: 10.1038/s41598-022-22530-4
  BibTeX: Download
• Thies M., Wagner F., Huang Y., Gu M., Kling L., Pechmann S., Aust O., Grüneboom A., Schett G., Christiansen SH., Maier A.:
  Calibration by differentiation – Self-supervised calibration for X-ray microscopy using a differentiable cone-beam reconstruction operator
  In: Journal of Microscopy (2022)
  ISSN: 0022-2720
  DOI: 10.1111/jmi.13125
  BibTeX: Download
• Wagner F., Thies M., Gu M., Huang Y., Pechmann S., Patwari M., Ploner S., Aust O., Uderhardt S., Schett G., Christiansen SH., Maier A.:
  Ultra low‐parameter denoising: Trainable bilateral filter layers in computed tomography
  In: Medical Physics 49 (2022), p. 5107-5120
  ISSN: 0094-2405
  DOI: 10.1002/mp.15718
  BibTeX: Download

Conference Contributions

• Gu M., Vesal S., Kosti RV., Maier A.:
  Few-shot Unsupervised Domain Adaptation for Multi-modal Cardiac Image Segmentation
  German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
  In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
  DOI: 10.1007/978-3-658-36932-3_5
  BibTeX: Download
• Thies M., Wagner F., Gu M., Folle L., Felsner L., Maier A.:
  Learned Cone-Beam CT Reconstruction Using Neural Ordinary Differential Equations
  7th International Conference on Image Formation in X-Ray Computed Tomography (Baltimore, June 12, 2022 - June 16, 2022)
  In: Proceedings Volume 12304, 7th International Conference on Image Formation in X-Ray Computed Tomography; 1230409 (2022) 2022
  DOI: 10.1117/12.2646442
  BibTeX: Download
• Wagner F., Thies M., Karolczak M., Pechmann S., Huang Y., Gu M., Kling L., Weidner D., Aust O., Schett G., Christiansen S., Maier A.:
  Monte Carlo Dose Simulation for In-Vivo X-Ray Nanoscopy
  German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
  In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
  DOI: 10.1007/978-3-658-36932-3_22
  BibTeX: Download

2021

Journal Articles

• Vesal S., Gu M., Kosti RV., Maier A., Ravikumar N.:
  Adapt Everywhere: Unsupervised Adaptation of Point-Clouds and Entropy Minimisation for Multi-modal Cardiac Image Segmentation
  In: IEEE Transactions on Medical Imaging (2021)
  ISSN: 0278-0062
  DOI: 10.1109/TMI.2021.3066683
  BibTeX: Download

2020

Journal Articles

• Vesal S., Gu M., Maier A., Ravikumar N.:
  Spatio-temporal Multi-task Learning for Cardiac MRI Left Ventricle Quantification
  In: IEEE Journal of Biomedical and Health Informatics (2020)
  ISSN: 2168-2194
  DOI: 10.1109/JBHI.2020.3046449
  URL: https://ieeexplore.ieee.org/document/9302580
  BibTeX: Download