2021

Journal Articles

• Ploner S., Kraus M., Moult EM., Husvogt L., Schottenhamml J., Yasin Alibhai A., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
  Efficient and high accuracy 3-D OCT angiography motion correction in pathology
  In: Biomedical Optics Express 12 (2021), p. 125-146
  ISSN: 2156-7085
  DOI: 10.1364/BOE.411117
  BibTeX: Download
• Husvogt L., Ploner S., Chen S., Stromer D., Schottenhamml J., Alibhai AY., Moult E., Waheed NK., Fujimoto JG., Maier A.:
  Maximum a posteriori signal recovery for optical coherence tomography angiography image generation and denoising
  In: Biomedical Optics Express 12 (2021), p. 55-68
  ISSN: 2156-7085
  DOI: 10.1364/BOE.408903
  URL: https://www.osapublishing.org/boe/fulltext.cfm?uri=boe-12-1-55&id=444277
  BibTeX: Download
• Schottenhamml J., Moult EM., Ploner S., Chen S., Novais E., Husvogt L., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
  OCT-OCTA segmentation: Combining structural and blood flow information to segment bruch's membrane
  In: Biomedical Optics Express 12 (2021), p. 84-99
  ISSN: 2156-7085
  DOI: 10.1364/BOE.398222
  BibTeX: Download

2020

Conference Contributions

• Husvogt L., Ploner S., Stromer D., Schottenhamml J., Moult E., Fujimoto JG., Maier A.:
  Compressed sensing for optical coherence tomography angiography volume generation
  International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
  In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
  DOI: 10.1007/978-3-658-29267-6_19
  BibTeX: Download
• Hoßbach J., Husvogt L., Kraus M., Fujimoto JG., Maier A.:
  Deep OCT angiography image generation for motion artifact suppression
  International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
  In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
  DOI: 10.1007/978-3-658-29267-6_55
  BibTeX: Download
• Fu W., Husvogt L., Ploner S., Fujimoto JG., Maier A.:
  Modularization of deep networks allows cross-modality reuse: lesson learnt
  International workshop on Algorithmen - Systeme - Anwendungen, 2020 (Berlin, March 15, 2020 - March 17, 2020)
  In: Thomas Tolxdorff, Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus H. Maier-Hein, Christoph Palm (ed.): Informatik aktuell 2020
  DOI: 10.1007/978-3-658-29267-6_61
  BibTeX: Download

2019

Journal Articles

• Moult EM., Alibhai AY., Rebhun CB., Lee B., Ploner S., Schottenhamml J., Husvogt L., Baumal CR., Witkin AJ., Maier A., Duker JS., Rosenfeld P., Waheed NK., Fujimoto JG.:
  Spatial Distribution of Choriocapillaris Impairment in Eyes with Choroidal Neovascularization Secondary to Age-Related Macular Degeneration
  In: Retina-The Journal of Retinal and Vitreous Diseases (2019)
  ISSN: 0275-004X
  DOI: 10.1097/IAE.0000000000002556
  URL: https://journals.lww.com/retinajournal/Abstract/publishahead/SPATIAL_DISTRIBUTION_OF_CHORIOCAPILLARIS.96058.aspx
  BibTeX: Download

Conference Contributions

• Ploner S., Schottenhamml J., Moult EM., Husvogt L., Alibhai AY., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
  Correction of artifacts from misregistered B-scans in orthogonally scanned and registered OCT angiography
  ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
  In: Investigative Ophthalmology & Visual Science 2019
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2745781&resultClick=1
  BibTeX: Download
• Lee B., Chen S., Moult EM., Alibhai AY., Carrasco-Zevallos O., Husvogt L., Mehta N., Waheed NK., Duker JS., Fujimoto JG.:
  Ultrahigh-Resolution SD-OCT of the Human Retina with Extended Imaging Range Using Reference Arm Length Modulation
  ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
  In: Investigative Ophthalmology & Visual Science 2019
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2746181&resultClick=1
  BibTeX: Download
• Husvogt L., Ploner S., Moult EM., Alibhai AY., Schottenhamml J., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
  Using Medical Image Reconstruction Methods for Denoising of OCTA Data
  ARVO Annual Meeting 2019 (Vancouver, B.C., Canada, April 28, 2019 - May 2, 2019)
  In: Investigative Ophthalmology & Visual Science 2019
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2746928&resultClick=1
  BibTeX: Download

2018

Journal Articles

• Schirrmacher F., Köhler T., Endres J., Lindenberger T., Husvogt L., Fujimoto JG., Hornegger J., Dörfler A., Hoelter P., Maier A.:
  Temporal and Volumetric Denoising via Quantile Sparse Image Prior
  In: Medical Image Analysis 48 (2018), p. 131-146
  ISSN: 1361-8415
  DOI: 10.1016/j.media.2018.06.002
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2018/Schirrmacher18-TAV.pdf
  BibTeX: Download
• Rebhun CB., Moult EM., Ploner S., Moreira-Neto C., Alibhai AY., Schottenhamml J., Lee B., Choi W., Rifai FA., Tams M., Husvogt L., Baumal CR., Witkin AJ., Maier A., Rosenfeld P., Duker JS., Fujimoto JG., Waheed NK.:
  Analyzing relative blood flow speeds in choroidal neovascularization using variable interscan time analysis OCT angiography
  In: Ophthalmology Retina 2 (2018), p. 306-319
  ISSN: 2468-7219
  DOI: 10.1016/j.oret.2017.08.013
  URL: https://www.sciencedirect.com/science/article/abs/pii/S2468653017303561?via=ihub
  BibTeX: Download

Book Contributions

• Husvogt L., Ploner S., Maier A.:
  Optical Coherence Tomography
  In: Andreas MaierStefan SteidlVincent ChristleinJoachim Hornegger (ed.): Medical Imaging Systems, Cham: Springer, 2018, p. 251-261 (Lecture Notes in Computer Science book series (LNCS), Vol.11111)
  ISBN: 978-3-319-96520-8
  DOI: 10.1007/978-3-319-96520-8_12
  URL: https://link.springer.com/chapter/10.1007/978-3-319-96520-8_12
  BibTeX: Download

Conference Contributions

• Ploner S., Kraus MF., Husvogt L., Moult EM., Alibhai AY., Schottenhamml J., Geimer T., Rebhun CB., Lee B., Baumal CR., Waheed NK., Duker JS., Fujimoto JG., Maier A.:
  3-D OCT Motion Correction Efficiently Enhanced with OCT Angiography
  ARVO Annual Meeting 2018 (Honolulu, HI, April 29, 2018 - May 3, 2018)
  In: Investigative Ophthalmology & Visual Science 2018
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2694583&resultClick=1
  BibTeX: Download
• Husvogt L., Arya M., Alibhai AY., Moult EM., Duker JS., Waheed NK., Fujimoto JG., Maier A.:
  Automatic detection of capillary dilation and looping in patients with diabetic retinopathy from optical coherence tomography angiography data
  ARVO Annual Meeting 2018 (Honolulu, HI, USA, April 28, 2018 - May 3, 2018)
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2694335
  BibTeX: Download
• Husvogt L., Moult EM., Waheed NK., Fujimoto JG., Maier A.:
  Efficient Labeling of Optical Coherence Tomography Angiography Data using Eye Tracking
  Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
  In: Maier, Andreas
  Deserno, Thomas Martin
  Handels, Heinz
  Maier-Hein, Klaus
  Palm, Christoph
  Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin, Heidelberg: 2018
  DOI: 10.1007/978-3-662-56537-7_17
  URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_17
  BibTeX: Download
• Husvogt L., Alibhai AY., Moult EM., Fujimoto JG., Waheed NK., Maier A.:
  First Approaches Towards Automatic Detection of Microaneurysms in OCTA Images
  Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
  In: Maier, Andreas
  Deserno, Thomas Martin
  Handels, Heinz
  Maier-Hein, Klaus
  Palm, Christoph
  Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin, Heidelberg: 2018
  DOI: 10.1007/978-3-662-56537-7_11
  URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_11
  BibTeX: Download
• Schottenhamml J., Moult EM., Novais EA., Kraus M., Lee B., Choi W., Ploner S., Husvogt L., Lu CD., Yiu P., Rosenfeld P., Duker JS., Maier A., Waheed NK., Fujimoto JG.:
  OCT-OCTA Segmentation
  Bildverarbeitung für die Medizin 2018 (Erlangen, March 11, 2018 - March 13, 2018)
  In: Maier, Andreas
  Deserno, Thomas Martin
  Handels, Heinz
  Maier-Hein, Klaus
  C., Palm
  Tolxdorff, Thomas (ed.): Bildverarbeitung für die Medizin 2018, Berlin: 2018
  DOI: 10.1007/978-3-662-56537-7_76
  URL: https://link.springer.com/chapter/10.1007/978-3-662-56537-7_76
  BibTeX: Download
• Schirrmacher F., Köhler T., Husvogt L., Fujimoto JG., Hornegger J., Maier A.:
  Abstract: QuaSI - Quantile Sparse Image A Prior for Spatio-Temporal Denoising of Retinal OCT Data
  Bildverarbeitung für die Medizin 2018 (Erlangen)
  In: Informatik aktuell 2018
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2018/Schirrmacher18-AQQ.pdf
  BibTeX: Download

2017

Journal Articles

• Cole ED., Moult EM., Dang S., Choi W., Ploner S., Lee B., Louzada RN., Novais EA., Schottenhamml J., Husvogt L., Maier A., Fujimoto JG., Waheed NK., Duker JS.:
  The Definition, Rationale, and Effects of Thresholding in OCT Angiography
  In: Ophthalmology Retina 1/2017 (2017), p. 435-447
  ISSN: 2468-7219
  DOI: 10.1016/j.oret.2017.01.019
  URL: https://www.sciencedirect.com/science/article/abs/pii/S2468653017300283
  BibTeX: Download
• Skalet A., Li Y., Lu CD., Jia Y., Lee B., Husvogt L., Maier A., Fujimoto JG., Thomas CR., Huang D.:
  Optical Coherence Tomography Angiography Characteristics of Iris Melanocytic Tumors
  In: Ophthalmology 124 (2017), p. 197-204
  ISSN: 0161-6420
  DOI: 10.1016/j.ophtha.2016.10.003
  URL: https://www.sciencedirect.com/science/article/pii/S0161642016313288#!
  BibTeX: Download

Conference Contributions

• Alibhai AY., Moult EM., Rebhun CB., Moreira-Neto C., Novais EA., Lee B., Schottenhamml J., Husvogt L., Maier A., Rosenfeld P., Duker JS., Waheed NK., Fujimoto JG.:
  Flow Void Analysis: Multiscale Quantitation and Visualization of Choriocapillaris Alterations in Age-Related Macular Degeneration Using OCT Angiography
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science 2017
  Open Access: https://iovs.arvojournals.org/article.aspx?articleid=2637739&resultClick=1
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Alibhai17-FVA.pdf
  BibTeX: Download
• Ploner S., Moult EM., Schottenhamml J., Husvogt L., Lu CD., Rebhun CB., Alibhai AY., Duker JS., Waheed NK., Maier A., Fujimoto JG.:
  Hybrid OCT-OCTA Vessel Visualization for Projection-Free Display of the Intermediate and Deep Retinal Plexuses
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science 2017
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Ploner17-HOV.pdf
  BibTeX: Download
• Schottenhamml J., Moult EM., Novais EA., Kraus M., Lee B., Choi W., Ploner S., Husvogt L., Lu CD., Yiu P., Rosenfeld P., Duker JS., Maier A., Waheed NK., Fujimoto JG.:
  OCT-OCTA Segmentation: a Novel Framework and an Application to Segment Bruch's Membrane in the Presence of Drusen
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science 2017
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Schottenhamml17-OSA.pdf
  BibTeX: Download
• Lee B., Moult EM., Ploner S., Alibhai AY., Rebhun CB., Moreira-Neto C., Husvogt L., Maier A., Wollstein G., Schuman J., Waheed NK., Duker JS., Fujimoto JG.:
  Parallel Variable Interscan Time Analysis (VISTA) OCTA and en Face Doppler OCT of Optic Disc and Peripapillary Vasculature
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science 2017
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Lee17-PVI.pdf
  BibTeX: Download
• Yiu P., Moult EM., Ploner S., Lee B., Husvogt L., Maier A., Spaide RF., Duker JS., Waheed NK., Fujimoto JG.:
  Smoothed and Resolved Thresholding (SmaRT-) Display: A New OCTA Display Technique to Resolve the Low Flow Ambiguity
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science 2017
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Yiu17-SAR.pdf
  BibTeX: Download
• Moult EM., Ploner S., Choi W., Lee B., Husvogt L., Lu CD., Novais EA., Cole ED., Potsaid BM., Duker JS., Hornegger J., Maier A., Waheed NK., Fujimoto JG.:
  Visualizing microvascular flow variation in OCTA using variable interscan time analysis (VISTA)
  SPIE BiOS (San Francisco, CA, USA, January 28, 2017 - February 2, 2017)
  In: Proc. SPIE 10053, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXI 2017
  DOI: 10.1117/12.2254845
  URL: https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10053/1/Visualizing-microvascular-flow-variation-in-OCTA-using-variable-interscan-time/10.1117/12.2254845.full?SSO=1
  BibTeX: Download
• Moult EM., Ploner S., Rebhun CB., Alibhai AY., Lee B., Moreira-Neto C., Novais EA., Schottenhamml J., Husvogt L., Maier A., Rosenfeld P., Duker JS., Waheed NK., Fujimoto JG.:
  Variable Interscan Time Analysis (VISTA-) Optical Coherence Tomography Angiography (OCTA) of Blood Flow Speeds in Eyes with Diabetic Retinopathy
  ARVO Annual Meeting 2017 (Baltimore, MD, USA, May 7, 2017 - May 11, 2017)
  In: Investigative Ophthalmology & Visual Science, ARVO: 2017
  URL: https://iovs.arvojournals.org/article.aspx?articleid=2637998&resultClick=1
  BibTeX: Download
• Schirrmacher F., Köhler T., Husvogt L., Fujimoto JG., Hornegger J., Maier A.:
  QuaSI: Quantile Sparse Image Prior for Spatio-Temporal Denoising of Retinal OCT Data
  Medical Image Computing and Computer-Assisted Intervention (Quebec City, QC, Canada, September 11, 2017 - September 13, 2017)
  In: Medical Image Computing and Computer-Assisted Intervention - MICCAI 2017, Proceedings, Part II 2017
  DOI: 10.1007/978-3-319-66185-8_10
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2017/Schirrmacher17-QQS.pdf
  BibTeX: Download

2016

Journal Articles

• Schottenhamml J., Moult EM., Ploner S., Lee B., Novais EA., Cole ED., Dang S., Lu CD., Husvogt L., Waheed NK., Duker JS., Hornegger J., Fujimoto JG.:
  An Automatic, Intercapillary Area-based Algorithm for Quantifying Diabetes-related Capillary Dropout Using Optical Coherence Tomography Angiography
  In: Retina (Philadelphia, Pa.) 36 (2016), p. S93-S101
  ISSN: 1539-2864
  DOI: 10.1097/IAE.0000000000001288
  URL: https://www.ncbi.nlm.nih.gov/pubmed/28005667
  BibTeX: Download
• Ploner S., Moult EM., Choi W., Waheed NK., Lee B., Novais EA., Cole ED., Potsaid B., Husvogt L., Schottenhamml J., Maier A., Rosenfeld P., Duker JS., Hornegger J., Fujimoto JG.:
  Toward Quantitative Optical Coherence Tomography Angiography: Visualizing Blood Flow Speeds in Ocular Pathology Using Variable Interscan Time Analysis
  In: Retina (Philadelphia, Pa.) 32 (2016), p. S118-S126
  ISSN: 1539-2864
  DOI: 10.1097/IAE.0000000000001328
  BibTeX: Download
• Giacomelli M., Husvogt L., Vardeh H., Faulkner-Jones BE., Hornegger J., Connolly JL., Fujimoto JG.:
  Virtual Hematoxylin and Eosin Transillumination Microscopy Using Epi-Fluorescence Imaging
  In: PLoS ONE 11 (2016), p. 1-13
  ISSN: 1932-6203
  DOI: 10.1371/journal.pone.0159337
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Giacomelli16-VHA.pdf
  BibTeX: Download
• Lane M., Moult EM., Novais EA., Louzada RN., Cole ED., Lee B., Husvogt L., Keane PA., Denniston AK., Witkin AJ., Baumal CR., Fujimoto JG., Duker JS., Waheed NK.:
  Visualizing the Choriocapillaris Under Drusen: Comparing 1050-nm Swept-Source Versus 840-nm Spectral-Domain Optical Coherence Tomography Angiography
  In: Investigative Ophthalmology & Visual Science 57 (2016), p. OCT585-OCT590
  ISSN: 0146-0404
  DOI: 10.1167/iovs.15-18915
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Lane16-VTC.pdf
  BibTeX: Download

Conference Contributions

• Schottenhamml J., Moult EM., Ploner S., Lee B., Lu CD., Husvogt L., Waheed NK., Duker JS., Hornegger J., Fujimoto JG.:
  An automatic algorithm measuring the retinal intercapillary area to assess diabetic retinopathy
  ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
  In: Investigative Ophthalmology & Visual Science 2016
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Schottenhamml16-AAA.pdf
  BibTeX: Download
• Husvogt L., Moult EM., Lee B., Waheed NK., Hornegger J., Spaide RF., Maier A., Fujimoto JG.:
  SlicerOCT: A 3-D visualization platform for orthoplane viewing of OCT(A) datasets
  ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
  In: Investigative Ophthalmology & Visual Science, ARVO: 2016
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Husvogt16-SA3.pdf
  BibTeX: Download
• Ploner S., Moult EM., Waheed NK., Husvogt L., Schottenhamml J., Lee B., Hornegger J., Duker JS., Rosenfeld P., Fujimoto JG.:
  Toward quantitative OCT angiography: visualizing flow impairment using variable interscan time analysis (VISTA)
  ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
  In: Investigative Ophthalmology & Visual Science 2016
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Ploner16-TQO.pdf
  BibTeX: Download
• Husvogt L., Maier A., Hornegger J.:
  Advanced Image Processing for Optical Coherence Tomography Angiography
  10th Joint Workshop of the German Research Training Groups in Computer Science (Schloss Dagstuhl - Leibniz-Zentrum für Informatik)
  In: Benedikt Etzold, René Richter, Maximilian Eibl, Wolfgang Lehner (ed.): Proceedings of the 10th Joint Workshop of the German Research Training Groups in Computer Science, Chemnitz: 2016
  BibTeX: Download
• Giacomelli M., Yoshitake T., Husvogt L., Cahill L., Ahsen O., Vardeh H., Sheykin Y., Faulkner-Jones BE., Hornegger J., Brooker J., Cable AE., Connolly JL., Fujimoto JG.:
  Design of a portable wide field of view GPU-accelerated multiphoton imaging system for real-time imaging of breast surgical specimens
  SPIE Photonics West (San-Francisco, CA, February 14, 2016 - February 16, 2016)
  In: Multiphoton Microscopy in the Biomedical Sciences XVI 2016
  DOI: 10.1117/12.2209241
  URL: https://www.spiedigitallibrary.org/conference-proceedings-of-spie/9712/1/Design-of-a-portable-wide-field-of-view-GPU-accelerated/10.1117/12.2209241.full?SSO=1
  BibTeX: Download
• Louzada RN., Novais EA., Adhi M., Cole ED., Moult EM., Husvogt L., Witkin AJ., Baumal CR., Fujimoto JG., Duker JS., Waheed NK.:
  Choroidal Neovascularization Analyzed on Ultra-High Speed Swept Source Optical Coherence Tomography Angiography Compared to Spectral Domain Optical Coherence Tomography Angiography
  ARVO Annual Meeting 2016 (Seattle, WA, USA, May 1, 2016 - May 5, 2016)
  In: Investigative Ophthalmology & Visual Science, ARVO: 2016
  URL: https://www5.informatik.uni-erlangen.de/Forschung/Publikationen/2016/Louzada16-CNA.pdf
  BibTeX: Download