Mathias Oettl

2025

Unpublished Publications

• Öttl M., Mei S., Wilm F., Steenpaß J., Rübner M., Hartmann A., Beckmann M., Fasching P., Maier A., Erber R., Breininger K.:
  Analysing Diffusion Segmentation for Medical Images
  (2025)
  DOI: 10.48550/arXiv.2403.14440
  BibTeX: Download
• Wilm F., Ammeling J., Öttl M., Fick RHJ., Aubreville M., Breininger K.:
  Rethinking U-net Skip Connections for Biomedical Image Segmentation
  (2025)
  DOI: 10.48550/arXiv.2402.08276
  BibTeX: Download
• Mathias Öttl, Frauke Wilm, Jana Steenpass, Jingna Qiu, Matthias Rübner, Arndt Hartmann, Matthias Beckmann, Peter Fasching, Andreas Maier, Ramona Erber, Bernhard Kainz, Katharina Breininger:
  Style-Extracting Diffusion Models for Semi-Supervised Histopathology Segmentation
  (2025)
  DOI: 10.48550/arXiv.2403.14429
  BibTeX: Download

2023

Conference Contributions

• Qiu J., Wilm F., Öttl M., Schlereth M., Liu C., Heimann T., Aubreville M., Breininger K.:
  Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation
  In: The 26th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2023) 2023
  DOI: 10.48550/arXiv.2307.07168
  BibTeX: Download
• Öttl M., Steenpaß J., Rübner M., Geppert CI., Qiu J., Wilm F., Hartmann A., Beckmann M., Fasching P., Maier A., Erber R., Breininger K.:
  Improved HER2 Tumor Segmentation with Subtype Balancing Using Deep Generative Networks
  20th IEEE International Symposium on Biomedical Imaging, ISBI 2023 (Cartagena, April 18, 2023 - April 21, 2023)
  In: Proceedings - International Symposium on Biomedical Imaging 2023
  DOI: 10.1109/ISBI53787.2023.10230503
  BibTeX: Download
• Wilm F., Fragoso M., Bertram CA., Stathonikos N., Öttl M., Qiu J., Klopfleisch R., Maier A., Breininger K., Aubreville M.:
  Multi-scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset
  Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, July 2, 2023 - July 4, 2023)
  In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
  DOI: 10.1007/978-3-658-41657-7_46
  BibTeX: Download
• Rodriguez Salas D., Öttl M., Seuret M., Packhäuser K., Maier A.:
  Using Forestnets for Partial Fine-Tuning Prior to Breast Cancer Detection in Ultrasounds
  2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) (Cartagena, Colombia, April 18, 2023 - April 21, 2023)
  In: 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI) 2023
  DOI: 10.1109/ISBI53787.2023.10230424
  BibTeX: Download

2022

Conference Contributions

• Öttl M., Mönius J., Marzahl C., Rübner M., Geppert CI., Hartmann A., Beckmann M., Fasching P., Maier A., Erber R., Breininger K.:
  Superpixel Pre-segmentation of HER2 Slides for Efficient Annotation
  German Workshop on Medical Image Computing, 2022 (Heidelberg, DEU, June 26, 2022 - June 28, 2022)
  In: Klaus Maier-Hein, Thomas M. Deserno, Heinz Handels, Andreas Maier, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2022
  DOI: 10.1007/978-3-658-36932-3_54
  BibTeX: Download